Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3240 |
Symbol | |
ID | 6476294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3632126 |
End bp | 3633184 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642732437 |
Product | type IV pilus assembly protein PilM |
Protein accession | YP_002029622 |
Protein GI | 194367012 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCTCA TCCCAAAAAG TCAGTCGCCG CTTGTAGGCG TCGACATCAG TTCGACTGCG GTAAAGCTTT TGCAGCTGTC CCGCAGTGGC AATCGTTTTC GTGTGGAACA TTACGCTGTG GAACCTCTTC CGCCGAATGC GGTGGTGGAG AAGAACATCG TGGAAGTGGA GGCCGTGGGT GAGGCCATCC GCCGCGCGAT GAACCGCTCG GGGAGCAAGG CCAAGCTGGC CGCTGCCGCC GTCGCTGGGT CGGCGGTGAT CACCAAGGTG ATCCCAATGC CGGCCGAGCT CGACGAGAAC GACATGGAAG CCCAGATCGA GCTGGAAGCG GTCAACTACA TTCCGTACCC GATCGAGGAA GTGAACCTGG ACTTCGAGGT GATCGGGGCG ATCCCGAACA ACCCGGAGAT GGTCCAGGTG CTGCTGGCCG CGTCGCGTTC GGAAAACGTG GAACTGCGCC AGTCCGCGCT GGAACTGGGT GGCCTGCAGG CCAAGGTGAT GGACGTGGAG GCCTTCGCGG TCGAGAACGC CTATGCCCTG GTCGCCAGCG AGCTGCCGGT GTCCATCGAG GGCGTGGTCG CGCTGGTCGA CATCGGCGCC ACCATGACCA CCCTCAATGT CCTGCGCGGT GGCCGCAGCC TGTACAGCCG CGAACAGGTG TTCGGTGGCA AGCAGCTGAC CGACGAGATC ATGCGCCGCT ACGGCCTGAG CTACGAGGAA GCGGGCCTGG CCAAGCGCCA GGGCGGGCTG CCGGAAAGCT ACGAGATGGA AGTGCTGGAG CCGTTCAAGG AAGCCACGGT CCAGCAGATC AGCCGCCTGC TGCAGTTCTT CTATGCGGGC AGTGAATTCA ACCGCGTCGA TCACATTGTG CTGGCCGGTG GCTGCGCCGT GCTCGGTGGC CTGCCGGAAA TGGTCGAAGA GCAGCTGGGC GTGCCGACCG TGATCGCCAA CCCGCTGGCA CAGATGACCC TGGGCCCGAA GGTGAACGCA CATGCGCTGG CCCAGGATGC CCCCGCGCTG ATGATCGCCA CCGGTCTGGC GCTGAGGAGC TTCGACTGA
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Protein sequence | MGLIPKSQSP LVGVDISSTA VKLLQLSRSG NRFRVEHYAV EPLPPNAVVE KNIVEVEAVG EAIRRAMNRS GSKAKLAAAA VAGSAVITKV IPMPAELDEN DMEAQIELEA VNYIPYPIEE VNLDFEVIGA IPNNPEMVQV LLAASRSENV ELRQSALELG GLQAKVMDVE AFAVENAYAL VASELPVSIE GVVALVDIGA TMTTLNVLRG GRSLYSREQV FGGKQLTDEI MRRYGLSYEE AGLAKRQGGL PESYEMEVLE PFKEATVQQI SRLLQFFYAG SEFNRVDHIV LAGGCAVLGG LPEMVEEQLG VPTVIANPLA QMTLGPKVNA HALAQDAPAL MIATGLALRS FD
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