Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3215 |
Symbol | |
ID | 6476269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3601453 |
End bp | 3602106 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642732412 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_002029597 |
Protein GI | 194366987 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.246246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCG ACCACGGCAG GGATGTGCTG TTCTTCGACC TCGACGGCAC GCTGATCGAT TCGCAGGTGG GCATCACCGC CTGCATCGCC TACGCGCTGC AGAAGATGGA CCATCCGGTG CCGCCGCAGG ACACCCTGCT GGGCTGGATC GGTCCGTCGT TGCGGACCAC CTTCGCGCCG CTGTTCGTCG AACCGGCGCG GGTGGAACAG GCCGTCGGCT ACTACCGTGA ACGTTTCGAT GCCGAAGGCT GGCGCGAGCA CACGGTGTAT CCGCAGGTGG AAGACACGCT GCGCACGCTG CACGGTCGTG GTCACCGCCT GGCGGTGGTC ACCGCCAAGA ACGAGCCGCA TGCGCGCCGC ATCCTTGCCC ACCTGCCGTT CGGCGGGCTG TTCGAGGAGA TCGTCGGCTC GACCCTGGAT GGCTCGCGCA GCCACAAGCC GGAACTGGTC GGTGAAGCGC TGCGCCGGCT GCAGGTGCAG CCGGCGCACT GCTGGATGAT CGGCGACCGC CGCATGGACA TCGAAGGCGC GCGTCACCAC GGCCTGCGCA GCATCGGTGT GCTGTGGGGC TTCGGTGGCG AGCAGGAGCT GACCGAGGCC GGCGCCGGGC AACTGGCACG CGAACCGGCG CAGCTGGAAA CGCTGCTGGC GTGA
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Protein sequence | MNADHGRDVL FFDLDGTLID SQVGITACIA YALQKMDHPV PPQDTLLGWI GPSLRTTFAP LFVEPARVEQ AVGYYRERFD AEGWREHTVY PQVEDTLRTL HGRGHRLAVV TAKNEPHARR ILAHLPFGGL FEEIVGSTLD GSRSHKPELV GEALRRLQVQ PAHCWMIGDR RMDIEGARHH GLRSIGVLWG FGGEQELTEA GAGQLAREPA QLETLLA
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