Gene Smal_3086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3086 
Symbol 
ID6475985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3449877 
End bp3451913 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content67% 
IMG OID642732281 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002029468 
Protein GI194366858 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.12197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTG CTTCGGGCGC CACCAAGACC GGCAAGCTGC GGCTGGGCGG CAGCAACCTC 
TGGCTGTTCC TGCTGCTGGC ATCGATGATC CTGTTCGGCG TCAACACCGG CGTCGCCACC
TGGCAGGGCA GCCGCCTGGC CGATGCCGGC TCCAAGGCCG CCGACCTGCA GGTGCTGTCG
CAGCAGCTGG CCAACCAGGG CCGTGACGCG GTGGGTGGCA ACGCGCAGGC GTTCACCGCC
TTCAAGGCCA CCCGCAACGC GATCGAACAG AACGTGTCGA CCCTGCAGGG GCGCTACGGC
AAGGAGCCGG GCGTGTCCGG CGCGATCTCC ACGCTGGGTG AAACCTGGGC GCCGCTGGGC
AAGCAGGCCG GCCAGCTGGT CGCCAGTGAG CCGGCGGTGC TGGCCCTGGC TGGCAACGCC
AACAACTTCA GCGGCGCGGT GCCGGGCCTG CAGGCTCAGC TGAATGAACT GGTGCGTGCG
ATGTCCGCCT CCGGCGCGCC GTCGGCGCAG GTATACAGCG CGCTGCAACA GGTCGTGGTG
GCCGGTTCGA TGGCCCGTCG CGTGACCGAA ATGCGTGCCG GTGGCAGTGG TGCGGCCACT
GCCGGTGATG CGCTGGCACG TGACATCACC GTGTTCTCGC AGGTGCTCGA TGGCCTGCGC
AATGGCAACG AGGAACTGGG CATCACCGCC GTGCGTGGTG CCGCCGCCGT CGCTGCGCTG
GAGCAGTCAC AGCAGAAGTG GGAAGCGATG AAGCAGGACG CCGACGCGAT CCTGGCCAGC
TCGCGCCAGC TGTTTGCCGC ACAGTCCGCC GCCACCGCGC TGGGCCAGGG TTCGGCGCAC
ATGCTGGACG ACAGCCGCAA GCTGTTCGAA GCGTTCTCCT CGTTCGGTTC GGTGTCCGAT
ACCCGCCTGT TCCCGAATTT CTGGATTGGT GTGGTGTCCG GTGCGCTGTC GCTGATCGCG
ATCATCGGCT TCGTCTCCAC CAACGTGCGC AGCCGCTCGC GCGAGCAGGA GCTGCGCTAC
CAGACCCAGG TGGAGTTCAA CAGCCGCAAC CAGCAGGCGA TCATGCGGCT GCTGGACGAA
ATTTCCTCGC TGGGTGAGGG CGACCTGACC GTGAAGGCCT CGGTGACCGA GGACATGACC
GGCGCCATCG CCGACGCAAT CAATTACGCG GTTGACGAGC TGCGCCACCT GGTAACCACC
ATCAACGACA CCTCGGCCAA GGTCGCGCTG TCCACCCAGG AAACCCAGGC CACCGCCATG
CAGCTTGCAG AGGCGGCAGG CCACCAGGCC AACCAGATCA CCTCGGCCTC GGACCGCATC
GGCGAAATCG CGGCGAGCAT CGAGCAGGTG TCGCGCAACT CGGCCGAATC GGCCGACGTG
GCACAGCGTT CGGTGGTCAT CGCCGCCGAG GGTGCCGGCG TGGTCCGCGA GACCATCCAG
GGCATGGACC AGATCCGTGA CCAGATCCAG GAAACCTCCA AGCGCATCAA GCGCCTGGGT
GAATCGTCGC AGGAAATCGG CTCGATCGTG GAACTGATCA ACGACATTTC CGAACAGACC
AACATTCTGG CGTTGAACGC GGCGGTGCAG GCAGCTTCGG CCGGTGAGGC CGGCCGCGGT
TTTGCCGTGG TGGCCGACGA AGTGCAGCGC CTGGCAGAAC GCACCTCGGG GGCGACCCGA
CGCATCGAAA ACCTGGTGCA GGCGATCCAG GCCGATACCA ACGAAGCGGT CACCTCGATG
GAGCAGACCA CTGCCGAAGT GGTGTCCGGT GCGCGCCTGG CCGAAGACGC CGGTACCGCC
CTGACCGAAA TCGAGCGCGT GTCCAACGCC CTGAACAACC TCATCAAGAA CATCTCCATC
GCTGCCCAGC AGCAGTCCGC TGCGGCCTCG GACATCACCC GCACCATGGG CGTGATCCGG
CAGATCACCG GCCAGACCTC GCAGGGTGCC GGGCAGACCG CCGAATCGAT CGGCCACCTC
GCGCAGCTGG CGGCCGACCT GCGTCGTTCG GTCGCCGACT TCAAGCTGCC GGCGTGA
 
Protein sequence
MSTASGATKT GKLRLGGSNL WLFLLLASMI LFGVNTGVAT WQGSRLADAG SKAADLQVLS 
QQLANQGRDA VGGNAQAFTA FKATRNAIEQ NVSTLQGRYG KEPGVSGAIS TLGETWAPLG
KQAGQLVASE PAVLALAGNA NNFSGAVPGL QAQLNELVRA MSASGAPSAQ VYSALQQVVV
AGSMARRVTE MRAGGSGAAT AGDALARDIT VFSQVLDGLR NGNEELGITA VRGAAAVAAL
EQSQQKWEAM KQDADAILAS SRQLFAAQSA ATALGQGSAH MLDDSRKLFE AFSSFGSVSD
TRLFPNFWIG VVSGALSLIA IIGFVSTNVR SRSREQELRY QTQVEFNSRN QQAIMRLLDE
ISSLGEGDLT VKASVTEDMT GAIADAINYA VDELRHLVTT INDTSAKVAL STQETQATAM
QLAEAAGHQA NQITSASDRI GEIAASIEQV SRNSAESADV AQRSVVIAAE GAGVVRETIQ
GMDQIRDQIQ ETSKRIKRLG ESSQEIGSIV ELINDISEQT NILALNAAVQ AASAGEAGRG
FAVVADEVQR LAERTSGATR RIENLVQAIQ ADTNEAVTSM EQTTAEVVSG ARLAEDAGTA
LTEIERVSNA LNNLIKNISI AAQQQSAAAS DITRTMGVIR QITGQTSQGA GQTAESIGHL
AQLAADLRRS VADFKLPA