| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3061 |
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| Symbol | |
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| ID | 6475960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3417680 |
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| End bp | 3420637 |
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| Gene Length | 2958 bp |
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| Protein Length | 985 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642732256 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_002029443 |
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| Protein GI | 194366833 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00588952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGA ACAGCAACAA GCTGCGCGAT GCTGTGTGCG TTGCGTTGGC GGCCAGCGCC
GCATCCGTGG CCGGCACCGG CACGGCCCTC GCCCAGCAAG CGACCAATCT GGACCGCATC
GAAGTCACCG GTTCGCGCAT CCGTACCGTC GACGTCGAAA CCGCCCAGCC CGTCCTGACC
CTCAACCGCG CGGATATCGA GAAGCAGGGC TTCTCGTCGG TCGCCGACAT CCTGCAGAAC
ATCAGCGCCG TCGGTTCGCC GCCGATCAGC CGTGCCCAGC CGCTGTCCTC GGGCGAAGCC
GTGGGCGGTA CCTACATCAG CCTGCGTGAT CTCGGTGCCA CCCGTACCCT GGTGCTGCTC
AACGGCAAGC GCCTGGGCAT CACCACCGGT GGCCTGCAGG ACATCTCGAC CGTGCCGGTG
TCGGCCATCG AGCGCATTGA AGTGCTGAAG GATGGCGCTT CGTCGATCTA CGGTTCCGAT
GCTATCGCCG GCGTCATCAA CATCATCACC CGTACCAACT TCGAAGGCGC CACCGGCAGC
GTCTACTACG GCCAGTACAG TGAGGGCGAC GGTGCCACCC GCACCATGGA CTTCACCATG
GGCGTGAAGG GTGAGCGCGG TTCGCTGACC ATCGGTGCCG AGTACGCCAA GGAAGACAAG
GTGCGGGCGG CGGATCGTCC GTACGGTGCC TTCCCGCGCA GCGCCAACCA CCCGGACTTC
GGCTGGACCA CCGTCGGTGA ATTCGGTGGC TTCGTCAGCC GTCCGGCCGA TGGCCTGCCG
GGCGTCACCT ATCCGGCTGC CAGTGCGGGC AATCCCAACC GCGAAGTGCG CGTGATCCTG
CGTGAGGGTG GCAACCCGAA CAACAAGGCC GACTACGTCG CGCAGAACGT CAACAGCTTG
GTCACCAAGG ACAAGACCAA TACCAACCTG CAGACCGACC TGCGTACCCC GCAGGAACGC
CGCGCGGTGT TCGTCGATGG TATCTATGAC CTGACCGACA ATGTGCGCCT GCGCACCAAC
ATGCTGTACA GCTACCGCGA TTCGAACCGT CAGATCGCCG GCTACCCGTA CCAGGCGCTG
GCCTTCACTT CGCCGATGTC GGCCACCAGC GCGTTCAACC CGCTGGGCAC CGAAATCAGC
AACTGGTGGC GTCGTACCCT GGAAGTGCCG CGCAACACCC GCGCCGAACT GACCACGTTC
CGCTTCAGTG GTGGCCTGGA AGGCAGCTTC GAGTTCGCTG ACCGTCTGTT CGACTGGGAT
GTCGGCTACC TGTACAACAA CAACAAGCTG GTCCAGACCA GCACCGGTGA CCTCAACCTG
ACCGCGCTGC GTGCGGCGGT GGGCCCGTCC TTCATCAACA GCAGCGGCGT GGCGCAGTGC
GGTACCGCCG CCAGTCCGAT TCCGCTGAAC CAGTGCGTGC CGTACAACCC GTTCCTGCGT
GCCGGCATTC CGAGCAACGG TGCCAATGGC GCATTGACCG GCAATGATGC GCTGCAGAAG
CTGCTGTTCC CGGCGGCTCA CTCCACCGCC GAGACCACCA CCAAGGTCGT GACCGCCAAC
CTGGCCGGCA GCCTGTTCAC CCTGCCTGCG GGCGATCTGG GCTTCGCCGT CGGTATCGAA
CACCGCAAGG AAACGGGCAG CTTCAGCCCG GATGCGCTGG TGCAGTCGGG CAACACTTCC
GGCCTGGCCA ACTTCCCGAC CGGTGGTGGC TACAAGGTTG ACGAAGTCTA TGCCGAGTTC
AACATACCGA TCCTGGCCGA TCTGCCGGGC GCCCGCGAGC TGAGCCTCAA CGCGGCCACC
CGTCATTCGG ACTACGACAC CTTCGGCACC ACGCTGAACA GCAAGTTCGG CTTCAAATGG
AAGCCGGTCG ATTCAGTGCT GATCCGCGGT ACCTGGGCCG AGGGCTTCCG TGCCCCGACC
ATCGCCGACC TGTACAGCGG TGGTTCGCAG TCGTTCGACT TCTACACCGA TCCGTGCGAT
TCGGTCTATG GCGCTGCGCG TACCAATGCT GCGGTGCGTG CCCGTTGCGC CGCCGCACTG
CCGGCTGGCG TCAATGTCGC TAACTTCCGC CAGCAGCAGC AGGGCTTCAC CCCGACCACC
GCTGCGTCGT CGCAGACGCC GTTGGCCTTC GTTTCGGGTT CGAACGACCA GCTGACTCCG
GAAACCTCGA CGTCCAAGAC GCTGGGCGTG GTGTGGAGCC CGGGCTTCAT CCAGAACTTC
AACATGTCGC TGGACTGGTG GGAAATCCGT GTCGAGAACA CCATCATCGC CGACACGGCC
AACCTGATCC TCAACGATTG CTACCTCAAC GACATCGCGT CGCGCTGCTC GGCCTTCACG
CGCGACCCGG TGACCGGCAT CGTCAACAAC CTCAACCGCA CCGGCATCAA CGCCGGCTAC
CGCGAGGTGG AAGGCTTCGA TCTGGACGTC AGCTACCGCC TGCCGACCGA TCGCTTCGGT
AACTTCAGCG CGCAGTGGAC CAGCACCTAC ACCTCGCGTG ATGACCTGGT CACCACCAAG
AACCCGGTCA CCCACCCGAA CCCCCGCACC GGCGTGGGCT GGGCGGGCGG CGCGTTCCGC
GTGCGTTCGA ACCTGAACCT GGGTTGGGAA ATGGGTGACT TCGGCGCCAG CTGGACCGTT
CGTTACTTCT CGGGCATGAA GGAGTCGTGC CTGAGTGCTG TGACGTTCCC GGAAGAGTGC
AACCTGCCGA ACTACGCCTC GCCGAACAAC CAGGGCGTGG CCGTGGGCAG CGCGACCAAC
CAGCGTGGCG CAACGGTGTT CAACGACGTC CAGCTGCGCT GGAGCGCGCC GTGGAACGCG
ACCGTGGCGG TGGGTGCCAA CAACGTGTTC GGCCGCGTGG GCCCGACCAT GTACAGCCAG
CCGAACGCCA ACGTCTCCTA CTACGGTGGC TTCGACATCG GTCGCTTCCT GTACATGAAG
TACACGCAGC GCTTCTGA
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| Protein sequence | MKLNSNKLRD AVCVALAASA ASVAGTGTAL AQQATNLDRI EVTGSRIRTV DVETAQPVLT
LNRADIEKQG FSSVADILQN ISAVGSPPIS RAQPLSSGEA VGGTYISLRD LGATRTLVLL
NGKRLGITTG GLQDISTVPV SAIERIEVLK DGASSIYGSD AIAGVINIIT RTNFEGATGS
VYYGQYSEGD GATRTMDFTM GVKGERGSLT IGAEYAKEDK VRAADRPYGA FPRSANHPDF
GWTTVGEFGG FVSRPADGLP GVTYPAASAG NPNREVRVIL REGGNPNNKA DYVAQNVNSL
VTKDKTNTNL QTDLRTPQER RAVFVDGIYD LTDNVRLRTN MLYSYRDSNR QIAGYPYQAL
AFTSPMSATS AFNPLGTEIS NWWRRTLEVP RNTRAELTTF RFSGGLEGSF EFADRLFDWD
VGYLYNNNKL VQTSTGDLNL TALRAAVGPS FINSSGVAQC GTAASPIPLN QCVPYNPFLR
AGIPSNGANG ALTGNDALQK LLFPAAHSTA ETTTKVVTAN LAGSLFTLPA GDLGFAVGIE
HRKETGSFSP DALVQSGNTS GLANFPTGGG YKVDEVYAEF NIPILADLPG ARELSLNAAT
RHSDYDTFGT TLNSKFGFKW KPVDSVLIRG TWAEGFRAPT IADLYSGGSQ SFDFYTDPCD
SVYGAARTNA AVRARCAAAL PAGVNVANFR QQQQGFTPTT AASSQTPLAF VSGSNDQLTP
ETSTSKTLGV VWSPGFIQNF NMSLDWWEIR VENTIIADTA NLILNDCYLN DIASRCSAFT
RDPVTGIVNN LNRTGINAGY REVEGFDLDV SYRLPTDRFG NFSAQWTSTY TSRDDLVTTK
NPVTHPNPRT GVGWAGGAFR VRSNLNLGWE MGDFGASWTV RYFSGMKESC LSAVTFPEEC
NLPNYASPNN QGVAVGSATN QRGATVFNDV QLRWSAPWNA TVAVGANNVF GRVGPTMYSQ
PNANVSYYGG FDIGRFLYMK YTQRF
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