Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2978 |
Symbol | |
ID | 6475795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3314830 |
End bp | 3316638 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642732173 |
Product | GTP-binding protein LepA |
Protein accession | YP_002029360 |
Protein GI | 194366750 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0755515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0112986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCTG ATTCGATGCG GAACATCCGC AACTTCTCCA TCATCGCCCA CGTCGACCAC GGCAAGTCCA CGCTGGCCGA CCGCATCATC CAGCTCTGCG GCGGCCTCCA GGCCCGCGAG ATGGAAGCGC AGGTGCTCGA CTCCAACCCG ATCGAGCGTG AGCGTGGCAT CACCATCAAG GCGCAGTCGG TGTCGCTGCC GTACCTGGCC AAGGACGGGC AGACCTACCA TCTGAACTTC ATCGACACCC CGGGCCACGT CGACTTCTCC TATGAAGTCA GCCGCTCGCT GGCCGCCTGC GAAGGCGCGC TGCTGGTGGT CGACGCCGCC CAGGGCGTGG AAGCGCAGTC GGTGGCCAAC TGCTACACCG CTGTCGAGCA GGGCCTGGAA GTGGTGCCGG TGATCAACAA GATCGACCTG CCCACCGCCG ACATCGAGCG CGCCAAGGCC GAGATCGAGG CCGTGATCGG CATCGATGCC GCCGACGCCG TGCCGGTCAG CGCCAAGACC GGCCTGAACG TGCAGGACGT GCTGGAAGCC ATCGTGCACC GCATTCCGCC GCCGAAGCCG CGTGACACCG ACAAGCTGCA GGCGCTGATC ATCGACTCCT GGTTCGACAA TTACCTGGGC GTGGTCTCGC TGGTGCGCGT GATGCAGGGT GAGATCAAGG CCGGTGACAA GCTGCAGGTG ATGTCCACCG GCCGCAACCA CCAGGTCGAC AACGTCGGCG TGTTCACCCC GAAGCGCAAG GTGCTGCCGG CGCTGCGCGC CGGTGAAGTG GGTTGGGTCA CCGCCAGCAT CAAGGACGTG CACGGTGCGC CGGTCGGCGA CACCCTCACC CTGGCTGCCG ACCCGGCGCC GAAACCGCTG CCGGGCTTCC AGGAAATGCA GCCGCGCGTG TTCGCCGGCC TGTTCCCGGT CGATGCCGAA GACTACCCGG ACCTGCGCGA AGCGCTGGAC AAGCTGCGCC TGAACGATGC TGCGCTGCGC TTCGAGCCGG AAAGCTCCGA AGCAATGGGC TTCGGTTTCC GCTGCGGCTT CCTCGGCATG CTGCACATGG AGATCGTGCA GGAGCGCCTG GAACGCGAAT ACAACCTGGA CCTGATCAGC ACCGCGCCGA CGGTGGTGTA CGAGGTACTG AAGACCGACG GCACCATCAT CAACATGGAC AACCCGGCCA AGCTGCCGCC GGTGAACCAT GTCGAGGAGA TCCGCGAGCC GATCATCCGT GCCAACGTGC TCACCCCCGA GGAGTACATC GGCAACATCA TCAAGCTGTG CGAAGAAAAG CGTGGCAGCC AGATCGGCAT CAACTACCTG GGCAGCCAGG TGCAGATCAG CTATGAGCTG CCGATGGCCG AAGTGGTGCT GGACTTCTTC GACAAGCTGA AGTCGGTCAG CCGTGGCTAT GCGTCGCTGG ACTACCACTT CGTGCGCTTC GATGCCGGCC CGTTCGTGCG CGTCGACGTA CTGATCAACG GTGACAAGGT CGATGCGCTG TCGCTGATCG TGCACCGCAG TCACGCCGAT CGCCGCGGCC GCGAGCTGTG CGACAAGATG AAGGACCTGA TCCCGCGCCA GCAGTTCGAC GTGGCCATCC AGGCTGCCGT CGGCTCGCAG ATCATCGCCC GTACCACGGT CAAGGCCATG CGCAAGAACG TGCTGGCCAA GTGCTATGGT GGCGACGTTT CGCGCAAGAA GAAGCTTCTG GAAAAGCAGA AGGAAGGCAA GAAGCGCATG AAGCAGGTCG GCCGTGTGGA GATCCCGCAG GAAGCGTTCC TGGCCGTGCT GCAGATGGAC AACAAGTAA
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Protein sequence | MSSDSMRNIR NFSIIAHVDH GKSTLADRII QLCGGLQARE MEAQVLDSNP IERERGITIK AQSVSLPYLA KDGQTYHLNF IDTPGHVDFS YEVSRSLAAC EGALLVVDAA QGVEAQSVAN CYTAVEQGLE VVPVINKIDL PTADIERAKA EIEAVIGIDA ADAVPVSAKT GLNVQDVLEA IVHRIPPPKP RDTDKLQALI IDSWFDNYLG VVSLVRVMQG EIKAGDKLQV MSTGRNHQVD NVGVFTPKRK VLPALRAGEV GWVTASIKDV HGAPVGDTLT LAADPAPKPL PGFQEMQPRV FAGLFPVDAE DYPDLREALD KLRLNDAALR FEPESSEAMG FGFRCGFLGM LHMEIVQERL EREYNLDLIS TAPTVVYEVL KTDGTIINMD NPAKLPPVNH VEEIREPIIR ANVLTPEEYI GNIIKLCEEK RGSQIGINYL GSQVQISYEL PMAEVVLDFF DKLKSVSRGY ASLDYHFVRF DAGPFVRVDV LINGDKVDAL SLIVHRSHAD RRGRELCDKM KDLIPRQQFD VAIQAAVGSQ IIARTTVKAM RKNVLAKCYG GDVSRKKKLL EKQKEGKKRM KQVGRVEIPQ EAFLAVLQMD NK
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