| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2949 |
|---|
| Symbol | |
|---|
| ID | 6475696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 3284051 |
|---|
| End bp | 3284551 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642732144 |
|---|
| Product | protein of unknown function DUF45 |
|---|
| Protein accession | YP_002029331 |
|---|
| Protein GI | 194366721 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1451] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.12197 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCC TGAAGTACCT CACCGGCTAC CCCGAACCCC TGGTCGCCCA GGTCAGCGAA
CTGCTGGCGC AGGGCAAGCT CGGCCCCTGG CTGCAGCAGC GCTACCCCGA CCCGCATGAA
GTGCGCAGCG ACCGCCAGCT GTACGACTAC ACGCAGGACA TGAAGGACCG CTACCTGCGC
AAATCGGTGC CGCTCAACAA GGTCTGCTAC GACAATACGC TGGAAGTCAT CAAGCACGCA
CTGGGCACCC ACACCGCCAT TTCCCGCGTG CATGGTGGCC GCCTCAAGGC CAGCCGCGAG
ATCCGCATCG CCACCGTGTT CCGGCAGGCG CCGGCCGCAT TCCTGCGCAT GATCGTGGTG
CACGAGCTGG CGCACCTGAA GGAGGCCGAC CACAACAAGG CCTTCTACCA GCTGTGCCAG
CACATGGAGC CGGACTACCT GCAGCTGGAG TTCGATACCC GCCTGTACCT AACCGAGCTG
GCCAACCGTG GCCAGCGCTG A
|
|---|
| Protein sequence | MAVLKYLTGY PEPLVAQVSE LLAQGKLGPW LQQRYPDPHE VRSDRQLYDY TQDMKDRYLR
KSVPLNKVCY DNTLEVIKHA LGTHTAISRV HGGRLKASRE IRIATVFRQA PAAFLRMIVV
HELAHLKEAD HNKAFYQLCQ HMEPDYLQLE FDTRLYLTEL ANRGQR
|
|---|
| |