Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2865 |
Symbol | rimO |
ID | 6477364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3188350 |
End bp | 3189711 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642732060 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_002029248 |
Protein GI | 194366638 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAGC TGAACCCCAA AGTCGGCTTC GTCAGCCTTG GCTGCCCGAA GGCCCTTGTC GATTCCGAGC GCATCCTCAC CCAGTTGCGG TCCGAGGGAT ACGACATCGT CCCGTCCTAC GATTCGGCCG ACGTGGTGGT GGTCAACACC TGTGGCTTCA TCGATTCGGC GGTGACCGAG TCGCTGGACG CGATCGGCGA GGCGATGAAC CAGAACGGCA AGGTCATCGT CACCGGCTGC CTGGGCAAGC GCCCGGAACA GATCCGCGAG GCCTACCCGA ACGTGCTGGC GGTGTCCGGC CCGCAGGACT ACCAGAGCGT GATGGAGGCG GTGCACGAAG CGCTGCCGCC CAAGCACGAC CCGTTCGTGG ATCTGGTGCC TGACTACGGC ATCAAGCTGA CCCCGCGCCA CTACGCCTAC CTGAAGATTT CCGAAGGCTG CAATCACAAG TGCAGCTTCT GCATCATTCC ATCGATGCGC GGCAAGCTGG TCTCGCGCCC GGTCGATGAG GTGCTGCGTG AAGCCGAGCG CCTGGTGCGA GGCGGCGTGC GTGAGTTGCT GGTGGTGTCG CAGGACACCT CGGCCTATGG CGTGGACGTG AAGTACGCCG AGAAGATGTG GCGCGACAAG GCCTACCAGA CCCGTCTGAA GGCATTGTGC GAAGGCCTGT CCGAGCTGGA TGCGTGGGTG CGCATGCACT ACGTCTACCC GTACCCGCAC GTGGACGAGG TGGTACCGCT GATGGCCGAG AACCGCATCC TGCCGTACCT GGACATTCCG TTCCAGCACG CCAGCCCGCG CATCCTGCGC CTGATGAAGC GCCCCGGTGC GGTCGAGAAA ACCCTGGAGC GCGTGCAGAA CTGGCGCCGT ATCGCCCCGG ACATCACCGT GCGTTCGACC TTCATCGTTG GCTTCCCCGG CGAGACCGAG GCCGAGTTCG AGGAGCTGCT GTCGTTCCTG GACGAAGCGC AGCTGGACCG CGTCGGCGCG TTCGCCTATT CGCCGGTCGA GGGTGCCACC GCCAACGACC TGCCCGATGC GGTGCCGGAA GAGGTGAAGC AGGAGCGCTT GGCCCGTTTC ATGGAGAAGC AGGCGCAGAT TTCCGCCGCA CGCCTGGAAG CCAAAATTGG CACCGTGCAG CAGTGCCTGG TCGACGCCAT CGAAGGCGAT ATCGCGGTGG CCCGTTCCAA GGCCGATGCC CCGGAGATCG ATGGCCTGGT GCACATCCAG AATGCCGACC AGGTGGCGTT GCGCGTCGGT GAGTTCGTCG ACGTGGAAAT CACCGAGAGT GACGACCACG ATCTGTACGG CGATGCGTTG CCGGCTGCAG CCCGCCCGGC ACTCGACCTC AAGGTGCTGT GA
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Protein sequence | MSQLNPKVGF VSLGCPKALV DSERILTQLR SEGYDIVPSY DSADVVVVNT CGFIDSAVTE SLDAIGEAMN QNGKVIVTGC LGKRPEQIRE AYPNVLAVSG PQDYQSVMEA VHEALPPKHD PFVDLVPDYG IKLTPRHYAY LKISEGCNHK CSFCIIPSMR GKLVSRPVDE VLREAERLVR GGVRELLVVS QDTSAYGVDV KYAEKMWRDK AYQTRLKALC EGLSELDAWV RMHYVYPYPH VDEVVPLMAE NRILPYLDIP FQHASPRILR LMKRPGAVEK TLERVQNWRR IAPDITVRST FIVGFPGETE AEFEELLSFL DEAQLDRVGA FAYSPVEGAT ANDLPDAVPE EVKQERLARF MEKQAQISAA RLEAKIGTVQ QCLVDAIEGD IAVARSKADA PEIDGLVHIQ NADQVALRVG EFVDVEITES DDHDLYGDAL PAAARPALDL KVL
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