Gene Smal_2837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2837 
Symbol 
ID6477336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3154703 
End bp3155560 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content62% 
IMG OID642732032 
Productpolysaccharide deacetylase 
Protein accessionYP_002029220 
Protein GI194366610 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.28577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATG CCCGAACCGT ACCGGTGCTG ATGCACCACC ATGTCAGCAA CTCACCTGGC 
ATGATCACCG TATCCCCGGA GAACTTCGAG AGCCAGATCG CGTGGCTTGC ACGTACCGGC
TGGACGTCAT TGACGCTGGA CCAGTACGCC GGCTTCCTCG CCGGCAAACC GGTACCGCGC
AAGTCGATCG TGATCACGTT CGACGACGGC TATCTGGACA ACTGGGTCTA TGCCCATCCG
ATCCTGCAGA AGTACGGCAT GCATGCGGTG GTATTCGTGG TCACCGGCTG GATGCATGAA
GGTCCGGCGC GCCCGCACGC AGGCATCGAA GGCGCCCAGC TGCCGGCTAC GCCGGAGCAT
CGTGCCTGCG AAGACCTGAT CTACAAGCAG GGCCGCAGCG ACGAAGTGAT GATGCGCTGG
AGCGAAGCAC GCGCCGCGAT CGAGGCCGGC ACGTTCGAGG TCCACTGCCA TACCCACAGC
CACACCCGCT GGCTGAAGCG TGATGATCTG GATCGCGCAC AACGCCGGGA AGGCATCAGT
GGCGATCTGG CGATGGCCAA GCAAACGCTG CTCGAGAAGC TCGGCGAGGT CTCCGACACG
CTGTGCTGGC CTTATGGCGA CTTCGACGAT GACTACATCG AGGTGGCGCG CGAACAGGGC
TTCCGCTATC TGCACACCAC CCATCCATTT GGCCGCAACG TGGTTGGTGG AGATCCAGAG
CGCATCTACC GCTTTGCGAT CCGCAACCGC CCGGCCAGCT GGCTGCGCAA GCGCATCGCC
TGGAGTTACA ACCCGCTGAT TGCACCGATC TTCAACAGTT TCAAGGCGCG GCAGAAGAAG
ATGGTGCCGG GCCCGTAA
 
Protein sequence
MANARTVPVL MHHHVSNSPG MITVSPENFE SQIAWLARTG WTSLTLDQYA GFLAGKPVPR 
KSIVITFDDG YLDNWVYAHP ILQKYGMHAV VFVVTGWMHE GPARPHAGIE GAQLPATPEH
RACEDLIYKQ GRSDEVMMRW SEARAAIEAG TFEVHCHTHS HTRWLKRDDL DRAQRREGIS
GDLAMAKQTL LEKLGEVSDT LCWPYGDFDD DYIEVAREQG FRYLHTTHPF GRNVVGGDPE
RIYRFAIRNR PASWLRKRIA WSYNPLIAPI FNSFKARQKK MVPGP