Gene Smal_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2824 
Symbol 
ID6477322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3139900 
End bp3140994 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content61% 
IMG OID642732018 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_002029207 
Protein GI194366597 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00869776 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAT TGCTGTTGAA CGCGGTCGAC CCGCTGCACC AGTGGCTGCT CGGCCTTGGT 
GACATCGGCG CGCTGATCTG GATCATCCTG AAGATCCTGG TGATCACCGT TCCGGTGATC
GTCTCGGTGG CTTTCTACGT GGTCTGGGAA CGCAAGCTGA TCGGCTGGAT GCACGTCCGC
CACGGCCCGA TGTACGTAGG CATGGGCATC TTCCAGGCCT TCGCCGACGT CTTCAAACTG
CTGTTCAAGG AAGTGGTCCA GCCGAGCAGC GCCAACAAGG CGATCTACCT GCTGGCGCCG
CTGATCACCC TGGCTCCGGC CTTCGCGGCC TGGTCGGTGG TCCCCTTCGA TTCGCAGATC
GTGCTGTCCA ACGCCAACGC CGGCCTGCTG TACCTGCTGG CGATGACCTC GCTGGGCATC
TACGGCATCA TCCTGGCCGG TTGGGCATCC AACTCGAAGT ATGCGTTCCT GGGTGCGATG
CGCGCCTCGG CGCAGATGAT CAGCTACGAA ATCGCCATGG GCTTCGCTCT GGTCGGCGTG
ATGATCGCGT CGGGCAGCCT GAACCTGAGC AACATCGTGA TGGCGCAGGC CGGCAATTCC
GGTTTCTTCG ACTGGTTCCT GCTGCCGCTG TTCCCGCTGT TCGTCATCTA CTGGGTGTCG
GGCGTTGCCG AAACCAACCG CGCGCCGTTC GACGTGGTGG AAGGTGAATC GGAAATCGTC
GCCGGTCACA TGGTCGAGTA CTCGGGCGGT GCGTTCGCGC TGTTCTTCCT GGCCGAATAC
GCCAACATGA TCCTGATCAG CTTCCTGATC TCGATCTTCT TCCTCGGCGG CTGGCTGAGC
CCGATCCAGG GCTGGGTCAA CCCGGGCGAT ATCTCGCCGC TGGTCGACTG GATCTGGAAG
GGCGGTGCAC CGTGGCTGTT CGTCAAGGTG TTCTTCTTCG CCAGTGCCTA CATCTGGTTC
CGTGCCAGCT TCCCGCGCTT CCGCTATGAC CAGATCATGC GCCTGGGCTG GAAGGTCTTC
ATCCCGCTGG CCATTCTGTG GATCGCGGTT ACCGCCGTCA TGGTGTTCTT CGGCGTGATT
CAAAAGGGCG TCTAA
 
Protein sequence
MNELLLNAVD PLHQWLLGLG DIGALIWIIL KILVITVPVI VSVAFYVVWE RKLIGWMHVR 
HGPMYVGMGI FQAFADVFKL LFKEVVQPSS ANKAIYLLAP LITLAPAFAA WSVVPFDSQI
VLSNANAGLL YLLAMTSLGI YGIILAGWAS NSKYAFLGAM RASAQMISYE IAMGFALVGV
MIASGSLNLS NIVMAQAGNS GFFDWFLLPL FPLFVIYWVS GVAETNRAPF DVVEGESEIV
AGHMVEYSGG AFALFFLAEY ANMILISFLI SIFFLGGWLS PIQGWVNPGD ISPLVDWIWK
GGAPWLFVKV FFFASAYIWF RASFPRFRYD QIMRLGWKVF IPLAILWIAV TAVMVFFGVI
QKGV