Gene Smal_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2778 
Symbol 
ID6477273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3099287 
End bp3099952 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID642731969 
ProductHNH endonuclease 
Protein accessionYP_002029161 
Protein GI194366551 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.572366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAG ACACTACACG CTTGGGTCTG ATCGAAGCCG GAGCCCCGAT TTCTGCTCCG 
GGCGCCGAAG CATCGCCCAA CGCCACGACG CTGCATCGCC CCGGTTCGGT CCGGCTGCTC
TCGCTTGATG CCCACGGACG CGTACTGGAC TGGATCACCT GGCAGGATGC TGCCTGCCTC
TACGCCCGCG AAGCGGTGGC CTGGACGCTC GGCGATCCCT GCCTGCACAT CCACGGCGGC
ATCAACCGCT TCAGCGGCCT GCAGAGCGGG ATGGACCTGC ACCCGATCAT CGCCGCGCGT
GGCCATGCCC GCTCCCGTGC GATCGACCCC ACACCGAACC TGACCAACCC GGCCCTGTTC
GCCCGCGACG CCCACCTGTG CATGTACTGC GGCCAGCAGT TCGGCCGCCC CACGCTTACC
CGCGACCACG TCATGCCGCT GTCCAAGGGT GGCCTGGACT GCTGGGAAAA CGTGGTCACC
GCCTGCTTCC ACTGCAACTC GCGCAAGAGC GACCGCACGC CCCAGCAGGC CGGCATGCCA
CTGCTGGCGG TGCCCTACCG GCCCAGCTGG ATCGAGCACC TGATCCTGTC CAACCGCAAC
ATCCTGGCCG ACCAGATGGC CTTCCTGAAG GCGCAATTGC CCAAGCGGTC AAAACTGAGC
ACCTGA
 
Protein sequence
METDTTRLGL IEAGAPISAP GAEASPNATT LHRPGSVRLL SLDAHGRVLD WITWQDAACL 
YAREAVAWTL GDPCLHIHGG INRFSGLQSG MDLHPIIAAR GHARSRAIDP TPNLTNPALF
ARDAHLCMYC GQQFGRPTLT RDHVMPLSKG GLDCWENVVT ACFHCNSRKS DRTPQQAGMP
LLAVPYRPSW IEHLILSNRN ILADQMAFLK AQLPKRSKLS T