Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2777 |
Symbol | |
ID | 6477272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3097099 |
End bp | 3098889 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642731968 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_002029160 |
Protein GI | 194366550 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.932954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGCT ACACCGCCCC GCTTTCCGAC CTCCGTTTCG GCCTGCACGA CGTGCTCAAG GTCGAACCCC TGTTCGCCCG CCTGGGCTTC ACCGACGCCA CCGCCGACGT GGTCGATGCC GTGCTGGAAG AAGCCGGCCG TTTCAGCGCC ACCGTGCTGG CACCGCTCAA CAGCGTCGGC GATGAGATCG GCTGCGTGCT CGACCAGGCC AGCGGCGAAG TGACCACCCC GCCCGGCTTC AAGCAGGCCT ATGACCAGTT CGTGGACGGC GGCTGGACCG GCCTGACCGC CGCACCGGAG CTGGGCGGCC AGGGCCTGCC GCACACTCTG GGCGTGCCGC TCAACGAAAT GATCAATGCC GCCAACCTCG CCTGGGGCAA CTTCCCGCTG CTCTCGCACG GCGCCATCGA AGCCCTGAAG CAGCACGGCG AAGCGTGGCA GCACGAGGCC TTCCTGAAGC CACTGATCGA GGGCCGCTGG ACCGGCACCA TGTGCCTGAC CGAACCGCAT TGCGGCACCG ACCTGGGCCT GCTCAAGACC AAGGCCGAGC CGAATGCCGA CGGCAGCTAT TCGATCACCG GCACCAAGAT CTTCATCACC GCCGGCGAGC ACGACCTGAC CGGCAACATC GTGCACCTGG TGCTGGCCAA GCTGCCTGAC GCGCCCCCGG GTGCGAAGGG CATCTCGCTG TTCGTCACCC CGAAATTCAA GGTCGACCGC GATGGCAATG TCGGCGAGCG CAACGCGCTG CGCTGCGGCT CGATCGAGCA CAAGATGGGC ATCAAGGGTT CGGTCACCTG CGTGATGAAC TTCGATGGTG CGCAGGGCTA CCTGGTCGGC CAGCCGCACA AGGGCCTGCA GGCCATGTTC ACCATGATGA ACACTGCGCG CCTGGGTGTC GGCCTGCAGG GTATCGGCCT GTCCGAGCGC GCCTACCAGA ACGCGCTGAA ATACAGCCGC GAGCGCCTGC AGTCGCGTTC GCTCAGCGGC GCCAAATTCC CGGACAAGCC GGCCGACCCG ATCCTGGTGC ACCCGGACGT GCGCCGCATG CTGCTGACCA TCAAGTCGCT GGTCGAAGGC AGCCGTCTGC TGGCACTGCA CGCGGCCACC CTGATCGACG TCGCCCACCA CGCCGACGAT GCCGCCGAGC GTGAGCGCGC CGACACCCTG GTGAGCTTCC TGACCCCGAT CTCCAAGGCC TGCCAGACCG AATGGGGTAT CGAGAACACC TACAACGCCC TGCAGTGCTT CGGCGGCCAC GGCTACATCC GCGAACACGG CATGGAGCAG TTGGCCCGCG ATGCGCGCAT CACCACGCTG TATGAAGGCA CCACCGGCAT CCAGGCGCTG GACCTGATCG GCCGCAAGAC CGCCTCCAGT CAGGGCGCCG GCCTGAAGCT GATGCTGGCC GAGATCGAGG CGTTCGCCAA GGCCAACGAG GGCAACGAAG CGCTGGCCGA GTTCATCGGC CCGCTGCGCG CCAAGGCCGC CGAATGGGGC AAGCTGACCA TGGATGTGCT GCAGCGCTCG GCCGCCAATC CGGACGAACT CGGCGCGGCC AGCTACGACT ACCTGTTCTA TTCGGGTTAC GTGGTGCTGG CCTACTGGTG GGCCCGCAGC GTGGCCGCCG CCGATGCCAG CGCGCATGGC GCCGCCTTCG CCCAGGGCAA GCGCGAGACC GCACGGTTCT ACTTCGCCCG CGTGTTGCCG CGCACGCTCA GCCACGCCGC CGCGATCCAG GCCGGCGCCG CCCCGCTGAT GGCGATGGAC GACGAGCGCT TCGGCGCCTG A
|
Protein sequence | MSSYTAPLSD LRFGLHDVLK VEPLFARLGF TDATADVVDA VLEEAGRFSA TVLAPLNSVG DEIGCVLDQA SGEVTTPPGF KQAYDQFVDG GWTGLTAAPE LGGQGLPHTL GVPLNEMINA ANLAWGNFPL LSHGAIEALK QHGEAWQHEA FLKPLIEGRW TGTMCLTEPH CGTDLGLLKT KAEPNADGSY SITGTKIFIT AGEHDLTGNI VHLVLAKLPD APPGAKGISL FVTPKFKVDR DGNVGERNAL RCGSIEHKMG IKGSVTCVMN FDGAQGYLVG QPHKGLQAMF TMMNTARLGV GLQGIGLSER AYQNALKYSR ERLQSRSLSG AKFPDKPADP ILVHPDVRRM LLTIKSLVEG SRLLALHAAT LIDVAHHADD AAERERADTL VSFLTPISKA CQTEWGIENT YNALQCFGGH GYIREHGMEQ LARDARITTL YEGTTGIQAL DLIGRKTASS QGAGLKLMLA EIEAFAKANE GNEALAEFIG PLRAKAAEWG KLTMDVLQRS AANPDELGAA SYDYLFYSGY VVLAYWWARS VAAADASAHG AAFAQGKRET ARFYFARVLP RTLSHAAAIQ AGAAPLMAMD DERFGA
|
| |