Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2704 |
Symbol | |
ID | 6477194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3015903 |
End bp | 3017822 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642731890 |
Product | cytochrome c-type biogenesis protein CcmF |
Protein accession | YP_002029087 |
Protein GI | 194366477 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1138] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.114382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCCCG AACTGGGTCA GATCCTGCTG TTGTGCGCGC TGCTGGCCTC GCTGCTGCAG GCCGGGCTGC CGCTGGCCGG CGCGCAGCGC AACGACACGG CATGGATGGC GGTGGCGCGA CCGGCCGCGT TCGCACAGCT GCTGCTGCTT GCCGGTGCCT TCGCGGTGCT CACCGCCGCG TTCGTGCAGC AGGATTTCTC GGTGCGCTAC GTGGCCGAGA ACTCCAATTC GCTGCTGCCG ATGATCTACC GCTATTCGGC GGTCTGGGGC GCGCACGAGG GCTCGCTGCT GATGTGGGCG CTGGTGCTGG CGCTGTGGAC CGGTGCGGTG GCGCTGTTCT CGCGGCACCT GCCGGCACCG GTACAAGCGC GCGTACTGGC GGTGATGGGC GTGGTCAGCG TTGGCTTCCT CGCCTTCCTG ATCTTCACCT CCAATCCGTT CCTGCGCCTG AACCCGGCGC CGCTGGAGGG TCGTGACCTC AACCCGCTGC TGCAGGACCC CGGGCTGATC ATCCACCCGC CGATGCTCTA CATCGGTTAC GTCGGCTTCG CGGTGCCGTT CGCGTTCGCG GTGGCCGCAC TGCTGGAAGG ACGCGTCGAC GCCCGCTGGC TGCGCTGGAC GCGGCCTTGG ACCAACGTCG CCTGGGGTTT CCTGACCCTG GGGATCGCGC TGGGCAGCTG GTGGGCTTAC TACGAGCTCG GCTGGGGCGG CTGGTGGTTC TGGGACCCGG TGGAGAATGC GAGCTTCATG CCGTGGCTGG TCGGTGCGGC GCTGATCCAC TCGCAGGCCG TCACCGAGAA GCGCGGTACC TTCGGCAGCT GGACGTTGCT GCTGGCAATC GCCGCCTTCG CGCTGTCACT GCTGGGTACG TTCCTGGTGC GCTCCGGGGT ACTCACCAGC GTGCATTCGT TCGCTGCCGA TCCTTCGCGC GGCCTGTTCA TCCTGGTGTT CCTGTCGGTG CTGGTCGGCG GCAGCCTGCT GCTGTATGCA CTGCGCGCGC CACGTCTGTC GGTGAACGCC GACGATCCGC GCCGTGGCTT CATCGCGACA TCGCGCGAAA CCCTGCTGCT GGCCAACAAC CTGCTGCTGG CCACTGCCTG CGCCATGGTC CTGCTCGGCA CACTGTACCC GCTGCTGGCC GATGCGCTGT CGCTGGGCAA GATCTCGGTC GGCCCGCCCT ACTTCGGCAG CCTGTTCCTG TTGCTGATGG CGCCGATGAT CCTGCTGCTG CCGTTCGGCC CGCTGGTGAA GTGGCAGCGC GACCAGCCTT CGCGTGCATT CGCGTTGCTG GCACCGTGGC TGGGGCTGGC CATGTTGCTC GGCGCGCTGG CCTGGTGGCA GGCACCGCAG AATGGCTGGA AGGCTGGCCT GGGCGTCGCT GCAGCGGCCT GGGTCGGGTT GGGCACCGCC CGCTTCGTCT GGCAGCGCCT GCGCGGCAAC GGCCGCTTCA CCGCCGAAAT GCTTGGCATG ATCGTCGCCC ATGCCGGCAT TGCCGTGTTC CTGGCCGGTG CGCTGCTGGT GGAAGCACTC AACGTGCAGC GCGAAGTAGC GCTGGCACCC GGGCAACAGG TGGTGGTCGG CCGCCATGAA GTGCGCTTCG AAGGCGTGGA CCATCGCGAA GGTCCGAATT TCATCGCCGA CCGCGGCCAT CTGCGCGTGT TCCGCAACGG CCGCGAACTG GCCCTGCTGC ATCCGGAGAA GCGCCAGTAC GCCAGTGGCG GCCAGGTGAT GACCGAGGCC GGCATCGATG CACGCTTCGA CGGCGATGTC TACGTGGCAT TGGGCGAGCC GCTGGGCAAC AATGCATGGG CGGTACGGGT CCACATCAAG CCGTTCGTGC GCTGGATCTG GCTGGGCGCG CTGCTGATGG CCCTGGGCGG ATTCATCACC GCCGCCGACC GCCGCTTCCG TCGTCCGTAG
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Protein sequence | MLPELGQILL LCALLASLLQ AGLPLAGAQR NDTAWMAVAR PAAFAQLLLL AGAFAVLTAA FVQQDFSVRY VAENSNSLLP MIYRYSAVWG AHEGSLLMWA LVLALWTGAV ALFSRHLPAP VQARVLAVMG VVSVGFLAFL IFTSNPFLRL NPAPLEGRDL NPLLQDPGLI IHPPMLYIGY VGFAVPFAFA VAALLEGRVD ARWLRWTRPW TNVAWGFLTL GIALGSWWAY YELGWGGWWF WDPVENASFM PWLVGAALIH SQAVTEKRGT FGSWTLLLAI AAFALSLLGT FLVRSGVLTS VHSFAADPSR GLFILVFLSV LVGGSLLLYA LRAPRLSVNA DDPRRGFIAT SRETLLLANN LLLATACAMV LLGTLYPLLA DALSLGKISV GPPYFGSLFL LLMAPMILLL PFGPLVKWQR DQPSRAFALL APWLGLAMLL GALAWWQAPQ NGWKAGLGVA AAAWVGLGTA RFVWQRLRGN GRFTAEMLGM IVAHAGIAVF LAGALLVEAL NVQREVALAP GQQVVVGRHE VRFEGVDHRE GPNFIADRGH LRVFRNGREL ALLHPEKRQY ASGGQVMTEA GIDARFDGDV YVALGEPLGN NAWAVRVHIK PFVRWIWLGA LLMALGGFIT AADRRFRRP
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