Gene Smal_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2539 
Symbol 
ID6477029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2833439 
End bp2834638 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID642731725 
Productchorismate mutase 
Protein accessionYP_002028922 
Protein GI194366312 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.409768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA GCAAATCCAG CAAGAAGGCG CCGAAGAAGG CCGAACCGGC CAAGGATAGC 
GCGTCCACCA AGGCGAAGAG CAAGGCCAAG GCCGCCTCGA ATCCGGCGCC CACCCTGGCG
CCGCTGGCGC TGGCCGATGT GCGCTCGAAG ATCGACCAGA TCGACCGCGA CATCCAGAAC
CTGATCGCCG AGCGCGCACG CTTTGCCCAT CAGGTCGGCA AGGCCAAGGG CAAGCTCGCC
GCCGCCGTCG ACTACTACCG GCCCGAGCGC GAAGCGCAGG TGCTGCGCAT GGTGGTGGAC
CGCAACGAAG GCCCGCTCAG CGACGAGCTG CTGGTGCACG TCTACCGCGA GATCATGTCG
GCCTGCCTGG CCCAGCAGGA GCCGCTGAAG ATCGGCTACC TCGGCCCGGA AGGCACCTTC
AGCCAGCAGG CCGTGCTCAA GCACTTCGGC CGCTCGGCGC TGGGCCTGCC GATGGCCAGC
ATCGAAGAAG TGTTCCAGGA AGTGGAAGCG GGCAACGCCG ATTTCGGCGT GGTGCCAGTG
GAGAATTCCG GGCAGGGCAC CATCCAGATC ACCCTGGACA TGTTCCTGAC CTCCAACCTG
AAGATCTGTG GCGAAGTGGA ACTGCGAGTG CAGCAGTACC TGATGTCGCG CAGCGGCCGC
ATCGAGGACA TCGAGCGCAT CTATGCGCAC CCGCAGTCGT TCATGCAGAC CTCGGCGTGG
CTGCGCGCCA ACCTGCCGAA GGCCGAGAAG ATTCCAGTGT CGAGCAATGC CGAAGGCGCG
CGCCGTGCGC GCAACGCCGA CGACGCAGCG GCCATCGGTG GCGAGAGTGC CGGCCATGTG
TACGGCCTGA AGAAGGTGGT CACCAAGCCG ATCCAGAACG ACGCCGACAA CACCACCCGC
TTCCTGGTGG TGGGTCGCAA CATCTTCCCG ACCTCCGGCC ATGACCGCAC CTCGGTGCTG
GTGTTCATCC ATGACAAGCC CGGTGCGCTG TTCGACGTGC TCAGCCCGTT CGCCCGCCAC
GGCATCAGCA TGAACCGCAT CGAGTCGCGT CCGTCGCACC ACGGCAAGTG GGAATACGGC
TTCTTCATCG ACCTGGCCGG CCACATCGAC GACGCGCCGA TGCAGGCCGC GCTGGCCGAA
CTGGAAGCGC ACTCGGCGCA GATCAAGGTG CTCGGCTCCT ATCCGGTGGC CGTGCCCTGA
 
Protein sequence
MASSKSSKKA PKKAEPAKDS ASTKAKSKAK AASNPAPTLA PLALADVRSK IDQIDRDIQN 
LIAERARFAH QVGKAKGKLA AAVDYYRPER EAQVLRMVVD RNEGPLSDEL LVHVYREIMS
ACLAQQEPLK IGYLGPEGTF SQQAVLKHFG RSALGLPMAS IEEVFQEVEA GNADFGVVPV
ENSGQGTIQI TLDMFLTSNL KICGEVELRV QQYLMSRSGR IEDIERIYAH PQSFMQTSAW
LRANLPKAEK IPVSSNAEGA RRARNADDAA AIGGESAGHV YGLKKVVTKP IQNDADNTTR
FLVVGRNIFP TSGHDRTSVL VFIHDKPGAL FDVLSPFARH GISMNRIESR PSHHGKWEYG
FFIDLAGHID DAPMQAALAE LEAHSAQIKV LGSYPVAVP