Gene Smal_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2360 
Symbol 
ID6476843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2653025 
End bp2654164 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content67% 
IMG OID642731541 
ProductFMN-dependent alpha-hydroxy acid dehydrogenase 
Protein accessionYP_002028746 
Protein GI194366136 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCT CCGCCTCCAC CGATTACCGT GCCGCAGCGC AACGCCGGCT GCCGCCGTTC 
CTGTTCCACT ACATCGATGG CGGCGCGTAT GCCGAGCACA CGCTGAAGCG CAACGTTTCC
GACCTGTCCG ACATCGCGCT GCGCCAGCGC GTCCTGCGCA ACATGTCCGA CCTGAGCCTG
GAAACCGAGC TGTTCGGCGA AACGCTGGCA ATGCCGGTGG CGCTGGCGCC GGTCGGCCTG
ACCGGCATGT ATGCCCGGCG CGGTGAAGTG CAGGCGGCGC GTGCGGCCGA CAGCCGAGGC
ATTCCGTTCA CCCTGTCCAC CGTATCGGTG TGCCCGATCG AGGAAGTGGC ACCGGCCATC
CAGCGGCCAA TGTGGTTCCA GCTGTACGTG CTGCGCGACC GTGGCTTCAT GCGCAATGCG
CTGGAGCGGG CGCAGGCCGC AGGCGTGACC ACGCTGGTAT TCACCGTGGA CATGCCGGTG
CCGGGCGCGC GCTATCGTGA CGCGCACTCG GGCATGAGCG GCCCGAACGC CTCGCTGCGT
CGTATCGGCC AGGCCATCAC CCATCCGCAC TGGGCGTGGG ACGTGGGCCT GTTCGGTCGC
CCGCACGACC TGGGCAACAT TTCCACCTAC CGCGGCAACC CGACCGGGCT GGAGGATTAC
ATCGGCTGGC TGGGCAGCAA CTTCGATCCC TCCATTTCGT GGAAGGACCT GGAGTGGATC
CGCGAATTCT GGAAGGGGCC GATGGTGATC AAGGGCATTC TCGACCCGGA TGATGCACGG
GATGCGGTGA AGTTCGGCGC CGATGGCATC GTGGTCTCCA ACCACGGTGG TCGCCAGCTC
GATGGCGTGC TGTCCACCGC GCGTGCACTG CCGGCGATTG CCGATGCGGT GCAGGGCGAC
CTGAAGATCC TCGCCGATTC CGGCATCCGC ACTGGCCTGG ACGTGGTGCG CATGCTGGCG
CTGGGTGCCG ACACCGTGCT GCTGGGCCGT GCTTTCGTCT ATGCGCTGGC CGCGCAGGGC
GAGGCCGGCG TGGCCAACCT GCTGGACCTG ATCGCCAAGG AAATGCGCGT GGCGATGACG
CTGACCGGCG CGCGCCGCAT CGCCGACATC GGCCGCGATT CGCTGGTCAA CCTGCCGTGA
 
Protein sequence
MIISASTDYR AAAQRRLPPF LFHYIDGGAY AEHTLKRNVS DLSDIALRQR VLRNMSDLSL 
ETELFGETLA MPVALAPVGL TGMYARRGEV QAARAADSRG IPFTLSTVSV CPIEEVAPAI
QRPMWFQLYV LRDRGFMRNA LERAQAAGVT TLVFTVDMPV PGARYRDAHS GMSGPNASLR
RIGQAITHPH WAWDVGLFGR PHDLGNISTY RGNPTGLEDY IGWLGSNFDP SISWKDLEWI
REFWKGPMVI KGILDPDDAR DAVKFGADGI VVSNHGGRQL DGVLSTARAL PAIADAVQGD
LKILADSGIR TGLDVVRMLA LGADTVLLGR AFVYALAAQG EAGVANLLDL IAKEMRVAMT
LTGARRIADI GRDSLVNLP