Gene Smal_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2309 
Symbol 
ID6476792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2595439 
End bp2597211 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content70% 
IMG OID642731490 
ProductChloride channel core 
Protein accessionYP_002028695 
Protein GI194366085 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0529111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCGT CTGCTTTGCC ATCGCGCCTG CATCTGGCCT TCCAGGGCCT GCGCCTGCGG 
CTGCGCGGCA GCGACCTTTG GTTCATCGCG CTGGCCCTGC TGGTCGGCCT GATCGCCGGC
TACCTGACCC TGCTGCAATC CGGCATCGCA CGCTGGCTGC AGGGCACCCT GTACGGGCTG
GACGAAGGCA TGCGCCTGAG CTCCCTGCCC TCGCTGACCT GGACCGCGCT GTTGGTGCTG
CCGCTCGGTG GCCTGCTGGT CGGGCTGGTC AGCCTGGCCG CGACCCGGCT CAAGCGGCCC
CTGCTGGATG CGGTGGAAGC CAACGCCCTG CATGGCGGCC GCATGTCGAT GCGCGACAAC
CTGATCGTGC TGACCCAGAC CCTGCTGTCC AACGGCTGTG GCGCCTCGGT CGGGCTGGAG
GCCTCCTATA CCCAGATGGG TGCCGGCAGC GGCTCGCAGC TGGGCCGGGT GATGCGCCTG
CGCCGCAATG ATGTGCGCAT CCTGGTCGGC GCCGGTGCCG CCGGTGCCAT CGCCGCCGCC
TTTGGTGCGC CGCTGGCCGG CGCGTTCTAC GCCTTCGAGA TCGTCATCGG CGCCTACACC
CCGGCCGCAC TGGCGCCGGT GGCGGTCGCC GCGCTGGCCG GTGCATTCGT GGCCGACCAG
GCCGGCATCG AGGCCTATCT GCTGCCCGCT GCCTCGACGA TTGATGTGCG CGCCGCCGAC
TACGCCATCT ACGGCCTACT GGGGTGCTGC TGCGCGATGG TCGGCATCGC GGTGATGCGG
CTGATTGCCT CGATCGAGGG CACGGTCAAG CGCAGTCCGT TGCCGCTGTG GGGCCGGCCG
GTGGTCGGTG GCCTGCTGCT GATCCCGCTG GCGCTGGCCA GCCCACAGGT GCTGTCGTCC
GGCCATGGCG CCCTGCACCT GGACCTGACC ACGCACCTGC CACTGATCTG GATCGGTGGC
CTGCTGACCC TGAAGTGCCT GGCCTCCGGC ATCTCGCTCG GGTTTGGTTT CCGTGGCGGC
CTGTTCTTCG CCTCGTTGTT CATGGGCACC CTGGTCGGCG CCCTGTTCGC CGGCCTGCTG
GCGATGGCCA CCGGCGTGCC GGTGATCGAC GCCACCTCGG CCGCACTGGC CGGGATGGCA
GCGCTGGCCG CGGCGGTGGT CGGCGCACCG ATGACCATGG CCATGCTGGT ACTGGAAGGC
ACCCACGACT TCCTGCTGAC CAGCGTGGTG ATGAGCGCGG TGCTGGTCTC CAGCACGCTG
GTGCGGCAGT GGTTCGGTTA TTCGTTCTCG ACCTGGCGCA TGCACCTGCG CGGCGAGACC
ATCAAGAGCG CGCGCGACGT GGGCTGGGTG CAGAACCTCA ACGCCGGCCG GCTGATGCGC
AAGGGCGTGG CCACCGCGCC GGCCGACCTC GACGCCGCCG CCTTCCGCCA GCGCTTCCCG
CTGGGCTCGG GCAGCCGGGT GATCCTGATC GACAGCGAAG GCCACTACGC CGGCATCGTG
CAGATTCCGC GCGTGTACGG CGACGGCGTG AAGCCGGAAA CCGCCATTGG CGAACTGGCC
GAGAACCGCG ACGTGTCGCT GCTGCCAGGC GCGGACGTGG TTACGGTGAT GCAGCGCTTT
GACCAGACCC AGGCCGACGA ACTGGCCGTG GTCGCCGCCG ACGGCCAGGT GCTGGGCGTG
GTCTCCGAAG CCTTCGTGCG CAAGCGCTAC GCCGAGGAAC TGGACAAGCG CCAGCGCGAA
CTGATGGGCG AGCGGGTCGA GGACACCGAC TGA
 
Protein sequence
MSPSALPSRL HLAFQGLRLR LRGSDLWFIA LALLVGLIAG YLTLLQSGIA RWLQGTLYGL 
DEGMRLSSLP SLTWTALLVL PLGGLLVGLV SLAATRLKRP LLDAVEANAL HGGRMSMRDN
LIVLTQTLLS NGCGASVGLE ASYTQMGAGS GSQLGRVMRL RRNDVRILVG AGAAGAIAAA
FGAPLAGAFY AFEIVIGAYT PAALAPVAVA ALAGAFVADQ AGIEAYLLPA ASTIDVRAAD
YAIYGLLGCC CAMVGIAVMR LIASIEGTVK RSPLPLWGRP VVGGLLLIPL ALASPQVLSS
GHGALHLDLT THLPLIWIGG LLTLKCLASG ISLGFGFRGG LFFASLFMGT LVGALFAGLL
AMATGVPVID ATSAALAGMA ALAAAVVGAP MTMAMLVLEG THDFLLTSVV MSAVLVSSTL
VRQWFGYSFS TWRMHLRGET IKSARDVGWV QNLNAGRLMR KGVATAPADL DAAAFRQRFP
LGSGSRVILI DSEGHYAGIV QIPRVYGDGV KPETAIGELA ENRDVSLLPG ADVVTVMQRF
DQTQADELAV VAADGQVLGV VSEAFVRKRY AEELDKRQRE LMGERVEDTD