Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2309 |
Symbol | |
ID | 6476792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2595439 |
End bp | 2597211 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642731490 |
Product | Chloride channel core |
Protein accession | YP_002028695 |
Protein GI | 194366085 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0529111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACCGT CTGCTTTGCC ATCGCGCCTG CATCTGGCCT TCCAGGGCCT GCGCCTGCGG CTGCGCGGCA GCGACCTTTG GTTCATCGCG CTGGCCCTGC TGGTCGGCCT GATCGCCGGC TACCTGACCC TGCTGCAATC CGGCATCGCA CGCTGGCTGC AGGGCACCCT GTACGGGCTG GACGAAGGCA TGCGCCTGAG CTCCCTGCCC TCGCTGACCT GGACCGCGCT GTTGGTGCTG CCGCTCGGTG GCCTGCTGGT CGGGCTGGTC AGCCTGGCCG CGACCCGGCT CAAGCGGCCC CTGCTGGATG CGGTGGAAGC CAACGCCCTG CATGGCGGCC GCATGTCGAT GCGCGACAAC CTGATCGTGC TGACCCAGAC CCTGCTGTCC AACGGCTGTG GCGCCTCGGT CGGGCTGGAG GCCTCCTATA CCCAGATGGG TGCCGGCAGC GGCTCGCAGC TGGGCCGGGT GATGCGCCTG CGCCGCAATG ATGTGCGCAT CCTGGTCGGC GCCGGTGCCG CCGGTGCCAT CGCCGCCGCC TTTGGTGCGC CGCTGGCCGG CGCGTTCTAC GCCTTCGAGA TCGTCATCGG CGCCTACACC CCGGCCGCAC TGGCGCCGGT GGCGGTCGCC GCGCTGGCCG GTGCATTCGT GGCCGACCAG GCCGGCATCG AGGCCTATCT GCTGCCCGCT GCCTCGACGA TTGATGTGCG CGCCGCCGAC TACGCCATCT ACGGCCTACT GGGGTGCTGC TGCGCGATGG TCGGCATCGC GGTGATGCGG CTGATTGCCT CGATCGAGGG CACGGTCAAG CGCAGTCCGT TGCCGCTGTG GGGCCGGCCG GTGGTCGGTG GCCTGCTGCT GATCCCGCTG GCGCTGGCCA GCCCACAGGT GCTGTCGTCC GGCCATGGCG CCCTGCACCT GGACCTGACC ACGCACCTGC CACTGATCTG GATCGGTGGC CTGCTGACCC TGAAGTGCCT GGCCTCCGGC ATCTCGCTCG GGTTTGGTTT CCGTGGCGGC CTGTTCTTCG CCTCGTTGTT CATGGGCACC CTGGTCGGCG CCCTGTTCGC CGGCCTGCTG GCGATGGCCA CCGGCGTGCC GGTGATCGAC GCCACCTCGG CCGCACTGGC CGGGATGGCA GCGCTGGCCG CGGCGGTGGT CGGCGCACCG ATGACCATGG CCATGCTGGT ACTGGAAGGC ACCCACGACT TCCTGCTGAC CAGCGTGGTG ATGAGCGCGG TGCTGGTCTC CAGCACGCTG GTGCGGCAGT GGTTCGGTTA TTCGTTCTCG ACCTGGCGCA TGCACCTGCG CGGCGAGACC ATCAAGAGCG CGCGCGACGT GGGCTGGGTG CAGAACCTCA ACGCCGGCCG GCTGATGCGC AAGGGCGTGG CCACCGCGCC GGCCGACCTC GACGCCGCCG CCTTCCGCCA GCGCTTCCCG CTGGGCTCGG GCAGCCGGGT GATCCTGATC GACAGCGAAG GCCACTACGC CGGCATCGTG CAGATTCCGC GCGTGTACGG CGACGGCGTG AAGCCGGAAA CCGCCATTGG CGAACTGGCC GAGAACCGCG ACGTGTCGCT GCTGCCAGGC GCGGACGTGG TTACGGTGAT GCAGCGCTTT GACCAGACCC AGGCCGACGA ACTGGCCGTG GTCGCCGCCG ACGGCCAGGT GCTGGGCGTG GTCTCCGAAG CCTTCGTGCG CAAGCGCTAC GCCGAGGAAC TGGACAAGCG CCAGCGCGAA CTGATGGGCG AGCGGGTCGA GGACACCGAC TGA
|
Protein sequence | MSPSALPSRL HLAFQGLRLR LRGSDLWFIA LALLVGLIAG YLTLLQSGIA RWLQGTLYGL DEGMRLSSLP SLTWTALLVL PLGGLLVGLV SLAATRLKRP LLDAVEANAL HGGRMSMRDN LIVLTQTLLS NGCGASVGLE ASYTQMGAGS GSQLGRVMRL RRNDVRILVG AGAAGAIAAA FGAPLAGAFY AFEIVIGAYT PAALAPVAVA ALAGAFVADQ AGIEAYLLPA ASTIDVRAAD YAIYGLLGCC CAMVGIAVMR LIASIEGTVK RSPLPLWGRP VVGGLLLIPL ALASPQVLSS GHGALHLDLT THLPLIWIGG LLTLKCLASG ISLGFGFRGG LFFASLFMGT LVGALFAGLL AMATGVPVID ATSAALAGMA ALAAAVVGAP MTMAMLVLEG THDFLLTSVV MSAVLVSSTL VRQWFGYSFS TWRMHLRGET IKSARDVGWV QNLNAGRLMR KGVATAPADL DAAAFRQRFP LGSGSRVILI DSEGHYAGIV QIPRVYGDGV KPETAIGELA ENRDVSLLPG ADVVTVMQRF DQTQADELAV VAADGQVLGV VSEAFVRKRY AEELDKRQRE LMGERVEDTD
|
| |