Gene Smal_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2301 
Symbol 
ID6476784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2585827 
End bp2586351 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content69% 
IMG OID642731482 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002028687 
Protein GI194366077 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.288382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.197557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGG CCGTGCCCGC CGCCTCCAGC ACTGCGCTGG CGGGGTTCTA CCGCGAACAC 
CATGGCTGGC TGCTGGGCTG GCTGCGCCGC CGCACCCACA ACGCCGACTG CGCCGCCGAC
CTGACCCAGG ACACCTTCGT GCGCCTGCTC GGCCGTCGTG TCGATCCGTC CGAACTGCGC
CTGCCGCGTG CCTATCTCAG CACCATCGCG CACGCGCTGC TGGTCAATCA CTGGCAGCGC
GCGGACCTGG AGCGCGCCTA CCTGACGGCC TTGGCCGCGC AGCCGGAGCC GGTGCATCCA
TCGGCGGAGG AGCGCACGCA GGCGCTGCAG CTGCTGCATG CCATCGCCGA CATGCTGTCC
GGCCTGGCCG AGCGGCCACG CCGTGCGTTC CTGATGGCAC GACTGTCCGG CCTGGGCTAT
GCGGAGATCG GCCAACAACT GGGCGTGTCC GAACGCATGG TCAAGAAATA CATGGCGCAG
GCGATGCTGC ATTGCCTGCG CCTGTCCGGC GACGCAACAG CATGA
 
Protein sequence
MPMAVPAASS TALAGFYREH HGWLLGWLRR RTHNADCAAD LTQDTFVRLL GRRVDPSELR 
LPRAYLSTIA HALLVNHWQR ADLERAYLTA LAAQPEPVHP SAEERTQALQ LLHAIADMLS
GLAERPRRAF LMARLSGLGY AEIGQQLGVS ERMVKKYMAQ AMLHCLRLSG DATA