Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2301 |
Symbol | |
ID | 6476784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2585827 |
End bp | 2586351 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642731482 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002028687 |
Protein GI | 194366077 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.288382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.197557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATGG CCGTGCCCGC CGCCTCCAGC ACTGCGCTGG CGGGGTTCTA CCGCGAACAC CATGGCTGGC TGCTGGGCTG GCTGCGCCGC CGCACCCACA ACGCCGACTG CGCCGCCGAC CTGACCCAGG ACACCTTCGT GCGCCTGCTC GGCCGTCGTG TCGATCCGTC CGAACTGCGC CTGCCGCGTG CCTATCTCAG CACCATCGCG CACGCGCTGC TGGTCAATCA CTGGCAGCGC GCGGACCTGG AGCGCGCCTA CCTGACGGCC TTGGCCGCGC AGCCGGAGCC GGTGCATCCA TCGGCGGAGG AGCGCACGCA GGCGCTGCAG CTGCTGCATG CCATCGCCGA CATGCTGTCC GGCCTGGCCG AGCGGCCACG CCGTGCGTTC CTGATGGCAC GACTGTCCGG CCTGGGCTAT GCGGAGATCG GCCAACAACT GGGCGTGTCC GAACGCATGG TCAAGAAATA CATGGCGCAG GCGATGCTGC ATTGCCTGCG CCTGTCCGGC GACGCAACAG CATGA
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Protein sequence | MPMAVPAASS TALAGFYREH HGWLLGWLRR RTHNADCAAD LTQDTFVRLL GRRVDPSELR LPRAYLSTIA HALLVNHWQR ADLERAYLTA LAAQPEPVHP SAEERTQALQ LLHAIADMLS GLAERPRRAF LMARLSGLGY AEIGQQLGVS ERMVKKYMAQ AMLHCLRLSG DATA
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