| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2211 |
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| Symbol | |
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| ID | 6476542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2487635 |
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| End bp | 2490016 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642731393 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_002028598 |
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| Protein GI | 194365988 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.971398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTGA TGCGCAGCCT TGCCTGCAGC ACCGCGCTGG CCCTGGTGGT GGGCATGGCC
CACGTTCCGG CACCGGTGCT GGCGCAGGAC GCCCGCGATG AGCCGGTGCA GTTGAACCTG
GTGGAGACCG ATATCGGCGG TGTACTGCGC ATGGCGGCGC GCTTCACCGG TCGCCAGTTT
CTGGTCGACC CGCGGGTGAC CGGCAAGATG ACCGTGGTCT CTGATGGCCC GGTCAGCCGT
ACCCAGGCTT ACCAGTTGCT GCTTGGCGCA CTGCGCATGC GTGGCTTTGC CGTGGTCGAG
AACGGCGGTG TCAGCCGGGT GGTGCCGCAG GCCGACGCCA AGCTGCTTGG TGGGCGTGTG
GGCGCCGGCG GGGCCGGCGG CGAGGTGGCC ACGCGCACCT TCGCGCTGCG CTACGAGAAT
GCCGCCGCGC TGGTAGCGGT GCTGCGGCCG ATGATCAGCC CGGACAATCC GATCACTGCC
AACCCGGGCA ACAACACCCT GGTGATCACC GACTACGCCG ACAACCTGGA ACGCATCGCG
CGGGTGATTG CCAGCGTGGA CACTCCGGCG GGCATGGACA CCGACGTGGT CAAGCTGCAG
CAGGGTATCG CCGTCGACGT GGCGGCGATG GTCGCGCCGC TGCTGGATGC GCAGGGTGCC
GAACCCAACC AGAAGGTGGT GGTGATGGCC GACCCGCGCA GCAATAGCGT GCTTCTGCGC
TCCAGCAGCC CCGGCCGTAC CCGCCTGGCG CGGCAGCTGG TGGAGAAGCT GGACAAGGCG
CAGGACGAGT CCGGCAATCT GCATGTGGTC TACCTGCGCA ATGCCCAGGC CAACCAGCTG
GCCGGTGTGC TGCGCGGCGT GGTGGCCGGG CAGAGCGATG CACCGGCAAT GGGCAGCAAC
GAAGGCATCA CGCCACTGCC CGGCGATGCA AACCGTTCCA CACCCGCGCA ACCGTCGCAG
CCACAGCAGG CCAAGACCGG TGGCAATGCG CTGGAGTCGC AGCGGCTGGA CCCGAATCGC
CGTGATCCGA TTGATGCCGG CAGCACCGGT TTCAGCCAGA ACGGCATCTC GGTGCAGGCC
GACGTGGCGA CCAACACGCT GCTGATCTCG GCGCCTGAGC CGGTGTACCG CAACCTGCGG
CGGGTGATCG ATCAGCTCGA CCAGCGCCGT GCACAGGTAC TGGTGGAAAG CCTGATCGTG
GAAGTCAACC AGACCGACGC GGCCGAACTG GGCGTGCAGT GGATGCTGGG CAATGGCCGC
ACCTTCGGCG GCACCCATTT CGGTGGTACC AACGGCGGCA GCGGCCTGAA CACCGCCGCG
CGCACCACGC TGGACGTGCT GCCCAAGGAC GGTCTGAAGA TCGGCGTCAT CGACGGCACC
ATCAACCTGC CCGGCGTCGG TCAGATCCTC AACATGAAGG CGCTGGCCAA CGCGCTGCAG
AGCAAGGGCG GTGCCAACAT CCTGTCCACG CCGAACCTGA TGACGCTGGA CAACGAAGCG
GCCAGCATCA TGGTCGGCCA GACCGTACCG TTTGTCAGCG GTCGCTACGT GACCGACGGT
GGTGGCGGCA GCAACAACCC GTTCCAGACC ATCGTGCGCG AAGACGTGGG CCTGAAGCTG
CGGGTGCGCC CGCAGATCTC CGAGGGTGGC ACGGTGAAGC TGGACATCTA CCAGGAAGTC
AGCAGCATCG ACGCGCAGAG CGCGAACAGC ACGGTCGGCA TCATCACCAA CAAGCGCGCC
CTGGATACCA GCGTGCTGCT GGACGACGGC CAGATCATGG TGCTGGGTGG CCTGCTGGAA
GACAGCGTCA GCCATGGCCG TGATGCGGTG CCGGGGCTGG GAAAGATCCC GGTGCTGGGC
GCCTTGTTCC GCAGCGACAC GCGCAAGCGC GCCAAGACCA ACCTGATGGT GTTCCTGCGC
CCGCACGTGG TGCGTGACCC TGCCGCCGGG CAGCGCTTGA CCCGCGACCG CTACGACTAC
ATGCGCAATG CACAGGCCGG CACGCAGCCG GTACAGAGCT GGGCACTGCC CGCCTTGTCG
GCGCCGCAGC TGCCACCGCA GGACTTGTCT GTGCTCGGCC AGGGCAATGC GCGCGATGGA
CAGGGCCAGC CGCTGCAGAA CACCAGCCTG GCGGCGTTGT ATCCGGCCGG TGAGGGCGAT
GCCCAGCTGG TGCAGTTCGC GCATGGGTTG GACCCCGCGA GTGCCAGCCA AGGCGTGGCG
CAGGTGCGGG CACTGGGCCT GCAGGCGTAT GCCGAAGCGA CGCCCGGCGA GAGCGGGCAA
CGCCTGCGCG TGCGATTGCC ACGCGATCCG GCGACGCTGG ACCCGGCACT GCAGCAGCTG
CGCGGACTCG GCTACACGCC GGAACTGGTG ATCGGGCCGT GA
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| Protein sequence | MRVMRSLACS TALALVVGMA HVPAPVLAQD ARDEPVQLNL VETDIGGVLR MAARFTGRQF
LVDPRVTGKM TVVSDGPVSR TQAYQLLLGA LRMRGFAVVE NGGVSRVVPQ ADAKLLGGRV
GAGGAGGEVA TRTFALRYEN AAALVAVLRP MISPDNPITA NPGNNTLVIT DYADNLERIA
RVIASVDTPA GMDTDVVKLQ QGIAVDVAAM VAPLLDAQGA EPNQKVVVMA DPRSNSVLLR
SSSPGRTRLA RQLVEKLDKA QDESGNLHVV YLRNAQANQL AGVLRGVVAG QSDAPAMGSN
EGITPLPGDA NRSTPAQPSQ PQQAKTGGNA LESQRLDPNR RDPIDAGSTG FSQNGISVQA
DVATNTLLIS APEPVYRNLR RVIDQLDQRR AQVLVESLIV EVNQTDAAEL GVQWMLGNGR
TFGGTHFGGT NGGSGLNTAA RTTLDVLPKD GLKIGVIDGT INLPGVGQIL NMKALANALQ
SKGGANILST PNLMTLDNEA ASIMVGQTVP FVSGRYVTDG GGGSNNPFQT IVREDVGLKL
RVRPQISEGG TVKLDIYQEV SSIDAQSANS TVGIITNKRA LDTSVLLDDG QIMVLGGLLE
DSVSHGRDAV PGLGKIPVLG ALFRSDTRKR AKTNLMVFLR PHVVRDPAAG QRLTRDRYDY
MRNAQAGTQP VQSWALPALS APQLPPQDLS VLGQGNARDG QGQPLQNTSL AALYPAGEGD
AQLVQFAHGL DPASASQGVA QVRALGLQAY AEATPGESGQ RLRVRLPRDP ATLDPALQQL
RGLGYTPELV IGP
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