Gene Smal_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2056 
Symbol 
ID6476234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2304487 
End bp2305491 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content65% 
IMG OID642731238 
Productesterase, PHB depolymerase family 
Protein accessionYP_002028443 
Protein GI194365833 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.10962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCG GAATCGATTC GATCAAGGCG GTACTGCTGG TGTTGTGCAG CTGGCTGGCG 
ATGGCGGGCA GCGCGGTTGC CGCTGGCCCG GCCGGTCATT GGGATATCGG CCTTTACGGC
AATCTGTTCG GCGCCCGCGA GTACCAGGTA TGGGTGCCGG CCGGCTATGA CGACAGCCAG
CCGCTGCCGC TGCTGCTGGT GCTGCATGGC TGTGTGACCG GGCCGAACCT GATGGGCGAG
GCGTCAGGCT TCAATGATGT GGCCGACACG GAGGGGTTCA TCGTGGTCTA CCCCCGGCAG
AACGTCACCT CCAATCCGGC CCGCTGCTGG AACTGGCAGC TGCCGATCAA CCAGGCCCGC
GACAGCGGCG AAGCCTCGAT CCTGGCCGGC ATCGTGGACA AGGTGAAAGC GGGCTACAGC
GTGGATCCGC ACCGTGTCTA TGTCACCGGC ATTTCCGCGG GCGGCGCGAT GACCTCGATC
ATGCTGGCCT GCTATTCGGA TGTGTTCGCT GCCGGCGCCA TCCATTCCGG TGGCATGTTC
AAGGGTGCGA CCACGATTTC CGGTAGCGCC TATGCGTTGC TGGCCGGCAG CATCTATTCG
CCGGACAGCA ATGGCCGTCT GGCCTGGCAG TGCTCGGGAT CGCCGTCGCC GCGACCGCTG
CCGGTGCTGG TGTTCCATGG CAGCGCCGAT CTCACCGTCA ATCCGGTGAA CGGCCAGCAG
GCCGTGCGCC AGTTCCTGCA GACCAATGAT CTGGCCGACG ACGGCCTGGA CAACGACTCG
GTGAAGTACG TGCCGACCAG CACCTATCAC GGCCAGGTGC CGGGTGGACG TGCGTATACG
GTGGATACCT ACGCCTACGG TGGCAGGACG CTGGTGCAGC ACTATGTGGT GCAGGGCATG
GGCCACGCGT GGAGCGGCAG CCAGTCCGGC TTGCCGTTCA CCGACCCGAA GGGGCCGGAT
GCCACGCTGA TCACCTGGCT GTTCCTGAAG GACTACCAGC GCTGA
 
Protein sequence
MKSGIDSIKA VLLVLCSWLA MAGSAVAAGP AGHWDIGLYG NLFGAREYQV WVPAGYDDSQ 
PLPLLLVLHG CVTGPNLMGE ASGFNDVADT EGFIVVYPRQ NVTSNPARCW NWQLPINQAR
DSGEASILAG IVDKVKAGYS VDPHRVYVTG ISAGGAMTSI MLACYSDVFA AGAIHSGGMF
KGATTISGSA YALLAGSIYS PDSNGRLAWQ CSGSPSPRPL PVLVFHGSAD LTVNPVNGQQ
AVRQFLQTND LADDGLDNDS VKYVPTSTYH GQVPGGRAYT VDTYAYGGRT LVQHYVVQGM
GHAWSGSQSG LPFTDPKGPD ATLITWLFLK DYQR