Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2026 |
Symbol | |
ID | 6476204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2271524 |
End bp | 2272180 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642731208 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002028413 |
Protein GI | 194365803 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.148832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGAA GAACCAGGGA GGATGCACAC GCCACGCGTG AGAGGATCCT CGATGCCGCA CTGGTGTGCC TGCTGCGCCA TGGGCCCGCG GGCGCCACGC TGGAGCTGAT CGCCACCGAG TGCGGCCATT CGCGCGGCGC GATCTACTGG CACTTCGGGT CCCGTCAGAA CCTGCTGGGT GAACTTTCCG CGCGAGGGCG GCCAGATGCA CCCGAAGGAC TGCGGGAGGC CGCCATCCGG CAGTGTAATG ACCCGTTCAA GCTTCTGTTT GCGGACCTGG TCAGAGTCTT TGATCACACG CGTCGTACCC CACGCGTTCG CCGGACAGTT GAGCTTCTGC TGCGCTCTGG CGCATCACGT GAGCTCGGCG GCCTAGGCGA CGTGCTTGCA GCGTGCGCGA TGCCGGAGGT CCGCATGCTG GAGCTTATAT ACCAGCGTGC AGGAGCACTG GGCCAGCTCC GTGAGGGCGT TGATACAGCC ACTGCGGCGC GCAGCCTTCA TGCGATCGCG GTCGGTGTTC TGCTGGGATC AATCCTGGAG CCCGGCATCC TCGACCTGGA GATGGGCGCG GCACGCACCG TGGAAGACCT GCTCAGGCTG CACATGGCTG TTCCCTTCGC GACTGCCGGA ACGTGGTTCA CCCCATGTGC GGGCTGA
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Protein sequence | MARRTREDAH ATRERILDAA LVCLLRHGPA GATLELIATE CGHSRGAIYW HFGSRQNLLG ELSARGRPDA PEGLREAAIR QCNDPFKLLF ADLVRVFDHT RRTPRVRRTV ELLLRSGASR ELGGLGDVLA ACAMPEVRML ELIYQRAGAL GQLREGVDTA TAARSLHAIA VGVLLGSILE PGILDLEMGA ARTVEDLLRL HMAVPFATAG TWFTPCAG
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