Gene Smal_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2007 
Symbol 
ID6476185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2246264 
End bp2247052 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content67% 
IMG OID642731189 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002028394 
Protein GI194365784 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.511264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC TTCCCACCGT TCTGATCACT GGTGCTTCCA GCGGTATCGG CGCCGTCTAT 
GCCGAACGCT TCGCACGCCG TGGCCACGAC CTTGTACTGG TCGCGCGCGA TCAGTCCCGA
CTGGATGCAC TGGCCGCACG TCTGCGTCAG GACACCGGCG TCACCGTCGA TGTACTGGCA
GCTGACCTCA CCCTCAACGC TGACCTGGCC GCCGTCGAAG CCCGCCTGCG TGACGATGAC
CGCATCGGCA TCCTGATCAA CAACGCGGGC GTTGCGCAGG CCGGCGGCTT CACCGAGCAG
TCGGCCGAAA GCATTGACAC GATGGTGACG CTGAACACGC TGGCGCTGAC TCGGTTGGCC
GCCGCCGCTG CCCGGCGCCT GACGCAGGCT GGCACCGGTG CGATCGTGAA CATCGGCTCG
GTGGTGGGCC TGGCGCCGGA GCTGGGCATG TCCGTCTACG GCGCGACCAA AGCCTTCGCG
CTCTTTCTGT CGCAGGCCCT GAGCCTCGAA CTGGCGCCCA GCGGTGTCTA TGTGCAGGCG
GTGCTGCCTG CCGCTACGCG CACCGAGATC TGGGAACGTG CGGGCATCGA CATCAACACC
TTGCCAGAGG TGATGGATGT CGACGAACTG GTCGATGCGG CCCTGGTCGG CTTTGATCGC
CGCGAGGCGG TGACCATTCC GCCGCTGCAT GTGGCCTCGC GCTGGGACAC GCTGGACGCC
TCGCGTCAGG GCCTGCTCTC GGATATCCGC CAGGCGCACG CGGCCGAGCG CTATCGCAGC
GTCGCCTGA
 
Protein sequence
MSTLPTVLIT GASSGIGAVY AERFARRGHD LVLVARDQSR LDALAARLRQ DTGVTVDVLA 
ADLTLNADLA AVEARLRDDD RIGILINNAG VAQAGGFTEQ SAESIDTMVT LNTLALTRLA
AAAARRLTQA GTGAIVNIGS VVGLAPELGM SVYGATKAFA LFLSQALSLE LAPSGVYVQA
VLPAATRTEI WERAGIDINT LPEVMDVDEL VDAALVGFDR REAVTIPPLH VASRWDTLDA
SRQGLLSDIR QAHAAERYRS VA