Gene Smal_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1998 
Symbol 
ID6476176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2238803 
End bp2239282 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID642731180 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_002028385 
Protein GI194365775 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC GTCTGGATTA CGCCGCGCAA TCGCCGGAAC TGTTCAAGAA GCTCGGCCTG 
TACTCGCATG CCGCCCATAC CGCCTCGATC GAAGCGGCCA TCATCGATCT GGTCAACATC
CGTGCATCAC AGCTCAACGG CTGCGGCTTC TGCCTGGACA TGCACGTGAA GGAGGCCACC
CTGCGCGGCG AGCGCCCACT GCGCCTGCAT CACCTGGCGG CATGGCGTGA ATCGACGCTG
TTCAGCCCGC GCGAGCGCGC CTGCCTGGCC TGGACCGAGG TGCTGACCCA GCTGCCGGCG
CAGGGTGTGC CCGACGAGCT GTACGCGCGT GTGCGCGGCC AGCTGTCCGA GCAGGAGATC
GTCGACCTGA CCCACGCGGT GATGGCGATC AACGCCTGGA ACCGCGCCAA CGTCGCCTTC
CGTACTACGC CCGGCACCCT GGACGCGGCC TTTAGCCTGG ACAAGGCCGG CCTGGCCTGA
 
Protein sequence
MTARLDYAAQ SPELFKKLGL YSHAAHTASI EAAIIDLVNI RASQLNGCGF CLDMHVKEAT 
LRGERPLRLH HLAAWRESTL FSPRERACLA WTEVLTQLPA QGVPDELYAR VRGQLSEQEI
VDLTHAVMAI NAWNRANVAF RTTPGTLDAA FSLDKAGLA