Gene Smal_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1990 
Symbol 
ID6476097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2230583 
End bp2231644 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID642731172 
Productprotein of unknown function DUF182 
Protein accessionYP_002028377 
Protein GI194365767 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.492072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGAC CCGTGGCCTC ACCCGTCCTG GAGGCCTCTG CGGCAGCGGG AGTGGAGCCC 
GGGGATCCTG CCGTGCTCCT GTCGGCAGCG CCGGGCTTCC TCACCGAAGG CAGCCCGCGC
GGCGTGCTCG AAGCTGCCTT GACGCGCGTG CGCGCGGGGG AGCACGCCGT GCTCGCGCTG
GTGCTGGAAA CCGATGGCTC CACCTACGCC GGTGCCGGCG ACATGGTGCT GTTCTGCAAC
GGCAGCCAGG TCGGCTGGCT CAGCGGCGGA TGCCTGGAGC CCGAGCTCGC GCGCCGCGCG
GAGCAGGTGA GCGCGGCAGG GCAGGTCGAC TGGATCGAGA TCGACACCCG CAGTGACGAC
GACCTGCTGA GTGGGTCCGC ACTCGGGTGC CGCGGCCGGC TTCGGATTGC GCTGCTGCCA
TTGCGTGCCA TGACCGGCAT CGACGCCGTG ATTGAGGCAT GGCTCCGCGA GGGGGTGTCA
CTCCAGCGCG ACCTTCGCAC GTCGGGGCAG ATCGTCTTCC GCGCCGGCCA TCGCGAGCAG
GCATGGCAGC TGAATCCGAT GGACGGCACG CAGCCCTTTG GAGAAGCAGC GTGGCGTTTG
CCGTTGCCCC GGCTTCCGCG GGCCCTGGTG TTGGGGGGTG GTCCAGAAAC GCCCTTCCTG
GTTCCGTTGC TGCGGGGGCT GGGATGGCGG GTCAGCGTGG CCGAACGACG AGCGCGCTGG
TCCTCAGCGG GGCAGGGCGC GGATGCACAG CTCCAGGCGA GCCCGGCCGA GGCCCTCCAT
GCCGACCCGT GCGACGCGGT GCTGGTGATG CACCACGACT TCGAGCTGGA CCGCGAGGCA
CTGGTGGCCC TGGCCGATAC CGAGGTTGCC TTTATTGGAC TTCTGGGTCC GCGGCGAAGG
CGTGAGGATC TGTTCAAGCT GCTGACACCG GATCAGCGCC ACCGCCTGTC CCCGAGACTT
CGATCACCGG TCGGCCTCAA CATCGGAGGG CGGGGGCCAG AGGCGATCGC GCTCAGCATC
GCCGCACAGC TGCAGCAATG GCGCAGCACG GCCGGCAGGT GA
 
Protein sequence
MDRPVASPVL EASAAAGVEP GDPAVLLSAA PGFLTEGSPR GVLEAALTRV RAGEHAVLAL 
VLETDGSTYA GAGDMVLFCN GSQVGWLSGG CLEPELARRA EQVSAAGQVD WIEIDTRSDD
DLLSGSALGC RGRLRIALLP LRAMTGIDAV IEAWLREGVS LQRDLRTSGQ IVFRAGHREQ
AWQLNPMDGT QPFGEAAWRL PLPRLPRALV LGGGPETPFL VPLLRGLGWR VSVAERRARW
SSAGQGADAQ LQASPAEALH ADPCDAVLVM HHDFELDREA LVALADTEVA FIGLLGPRRR
REDLFKLLTP DQRHRLSPRL RSPVGLNIGG RGPEAIALSI AAQLQQWRST AGR