Gene Smal_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1936 
Symbol 
ID6476043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2177876 
End bp2179237 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content67% 
IMG OID642731118 
Productrecombination factor protein RarA 
Protein accessionYP_002028323 
Protein GI194365713 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.980875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.481513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAGAC ATCGTTCAAC TTCCTTCCCC GGCCCCGATC TGCTGAGCGT TGATCGGGAA 
CATATGCGCC CGCTCGCCGA GCGCATGCGC CCGCGCACCC TCGACGAGAT GGTCGGGCAG
AAGCGCCTGC TGGCGCCGGA CAGCGCGCTG CGTCGCGCGG TCGAATCCGG TCGCGTGCAT
TCGATGATCC TGTGGGGACC GCCGGGCTGC GGCAAGACCA CGCTGGCGCT GTTGCTGGCC
GAGTATTCCG ACGCCGAGTT CCGCGCCATC TCCGCCGTGC TGTCCGGCCT GCCGGAAGTG
CGCCAGGTGC TGGCCGAGGC CGCGCAGCGT TTCGCTGAAG GGCGGCGTAC CGTGCTGTTC
GTGGACGAAG TGCACCGCTT CAACAAGGCG CAGCAGGATG CGTTCCTGCC GCACATCGAG
CGCGGCACCA TCCTGTTCGT CGGTGCCACC ACCGAGAATC CGTCGTTCGA GCTGAACTCG
GCGCTGCTGT CGCGTTGCCG CGTGCACGTG CTGGAAGGCG TTTCGCCCAC CGACATCGTC
GAGGCGCTGG AACGTGCGCT GGGTGACCGC GAGCGCGGCT TGGGCGAGGA GGGCATCGAG
GTCGCTCCCG AACTACTGCT GGAAATCGCC ACCGCCGCCG ATGGTGACGT GCGTCGTGCG
CTGACCCTGC TGGAGATCGC CGCCGAGCTG GCGGGCGGGG AGGGCGGTCG CATCACCCCG
CAGACCCTGA CCCAAGTGCT GGCCGATCGC ACCCGTCGCT TCGACAAGGG CGGCGAGCAG
TTCTACGACC AGATCTCGGC ACTGCACAAG TCGGTACGTA GCTCCAATCC AGATGCCGCA
CTGTACTGGC TGACCCGCAT GCTCGATGGC GGCTGCGATC CGTCCTACCT GGCGCGCCGG
TTGACCCGCA TGGCCATCGA GGATATCGGC CTGGCCGATC CACGCGCGCA GAGCATGGCA
CTGGAGGCCT GGGACATTTA CGAGCGGCTG GGCAGCCCGG AAGGCGAACT GGCCTTTGCC
CAACTGGTGC TCTATCTGGC CAGTACCGCC AAATCGAACG CAGGCTATGC CGCCTTCAAC
CAGGCGAAGG CCGATGTGCG CGAGAGCGGT ACCGAAGAAG TGCCGCTGCA CCTGCGCAAT
GCGCCGACCA AGCTGATGAA GGAGCTGGGC TACGGCGCCG AATATCAGTA CGACCACGAT
GCCGAAGGTG GCATCGCACT GGATCAGACT GGCTTCCCTG ATGCGATGGG CGAACGGGTG
TACTACAGCC CGGTGCCGCG CGGGCTGGAA ATCAAGCTGA AGGAAAAGCT GGACCGGCTG
CGTGCCGAGC GTGAGGCTGC GCGGGCCGCG AAGGGCCGCT GA
 
Protein sequence
MARHRSTSFP GPDLLSVDRE HMRPLAERMR PRTLDEMVGQ KRLLAPDSAL RRAVESGRVH 
SMILWGPPGC GKTTLALLLA EYSDAEFRAI SAVLSGLPEV RQVLAEAAQR FAEGRRTVLF
VDEVHRFNKA QQDAFLPHIE RGTILFVGAT TENPSFELNS ALLSRCRVHV LEGVSPTDIV
EALERALGDR ERGLGEEGIE VAPELLLEIA TAADGDVRRA LTLLEIAAEL AGGEGGRITP
QTLTQVLADR TRRFDKGGEQ FYDQISALHK SVRSSNPDAA LYWLTRMLDG GCDPSYLARR
LTRMAIEDIG LADPRAQSMA LEAWDIYERL GSPEGELAFA QLVLYLASTA KSNAGYAAFN
QAKADVRESG TEEVPLHLRN APTKLMKELG YGAEYQYDHD AEGGIALDQT GFPDAMGERV
YYSPVPRGLE IKLKEKLDRL RAEREAARAA KGR