| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1880 |
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| Symbol | fliF |
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| ID | 6475905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2117541 |
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| End bp | 2119187 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642731062 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002028267 |
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| Protein GI | 194365657 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.364366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.660983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGT CGCTCTCCAA GGAATCCCTG AACGCCGAAA AGGCGGGCCA GTGGTTCGAT
CGGCTGCAAA GCCTGCAGAT CACCCGTCGG CTCGGACTGA TGGCGATGAT TGCCGTGGCC
GTAGCGGCCG GGCTGTTCGT GTTCTTCTGG TCGCAGAAGC CCGGCATGGT CCCGCTGTAT
ACCGGCCTGG ACCAGAAGGC CACCGCTGAG GCGACCGACC TGCTGCGCGC CGCCCAGATT
CCGTTCCAGC TGGACCCGGC CACCGGTGGC ATCACCGTGC CGGAAAAGAA CCTGCACGAC
GCCCGCCTGA AGCTGGCCGG CTCCGGCCTG ACCGACAGCG GCAAACTCGG CTTCGAGCTG
ATGGAACGCG ACCCGGGCTT CGGTGTCAGC CAGTTCGTGG AAAGCGCGCG CTACCAGCAT
GCGCTGGAGA CCGAGCTGTC GCGCACCATC AACACGCTGC GCCCGGTGCG CGATTCGCGC
GTGCACCTGG CCATTCCCAA GCCCAGCGCG TTCACCCGCC AGCGCGACGT CGCCAGTGCC
TCGGTGACGC TGGAACTGCG TGGCGGCCAG CAGCTGGAAC GCAGCCAGGT CGACGCCATC
GTGCACATGG TCGCAGCCAG CATCCCGGAC CTGGCACCGG AACGCGTGAC CGTGGTCGAC
CAGAGCGGCC GCATGCTCAG CGTCAGCGAC CCGAACAGCG AGGCCGCGGT CAACGCCGCC
CAGTTCGAGC AGGTGCGCCG CCAGGAAACC TCGTTCAACC AGCGCATCCG CGAACTGCTT
GAGCCGATGA CCGGCCCCGG CCGGGTCAAC CCGGAAGTCA GCGTGGATAT GGACTTCTCG
GTGACCGAGG AAGCGCGCGA ACTGTACAAC GGCGAGCCGC AGAAGCTGCG CAGCGAGCAG
ATGAGCGAGA ACAGCACCAC CACGCCGGGT CCGCAGGGCG TGCCGGGGGC CACCAGCAAC
AGTCCGCCGG GCCAGGCCGC TGCGCCGGCA ACCGCACAGA CTCCGACCGA AAGCAGCAAG
AACGCGACCC GAAACTACGA GCTGGACCGC ACCCTGCAGC ACACCCGCCA GCCGGCCGGC
CGCATCAAGC GCGTCTCGGT GGCGGTGCTG GTGGACAACG TGCCGCGCGC CGGTGCCAAC
GGCAAGGTCG CACCTCAGCC GCTGTCGGCC GCCGAACTGA CCCGCGTCGA GGCGCTGGTC
AAGCAGGCGG TCGGCTTCAA CGCCGAGCGT GGCGACACCG TGTCGGTGAT GAATGCCCCG
TTTGTGCGTG ACACCACGCC GGTCGAAGGC CCGGCATGGT GGGAGCTGCC GTGGGTACAC
GACGCCGGCC GCATGCTGCT GGGTGCCGTG GTGGTGCTGG CGTTGCTGTT CGGCGTGCTG
CGCCCTGCAC TGCGCGCGAT CACCGGCCAG AACAAGAAGA ACGACGAGCA GGCACTGGAA
CCGCATACCG CGGACGTGCA GCTGGTCGAT GACGATGGCA TGCCGCTGCC GGCGCTGGGC
GCCGACCGGG CCAGCCTGGG CGGGCCGGAC GCATTGGCTC TGCCGGTGGA TTCATATGAG
GAACGACTGC GGATGGCGCG TGAAGCCGTG AAGACCGACT CCAAGCGCGT GGCCCAGGTG
GTCAAGGGCT GGGTGGCCAA TGACTGA
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| Protein sequence | MALSLSKESL NAEKAGQWFD RLQSLQITRR LGLMAMIAVA VAAGLFVFFW SQKPGMVPLY
TGLDQKATAE ATDLLRAAQI PFQLDPATGG ITVPEKNLHD ARLKLAGSGL TDSGKLGFEL
MERDPGFGVS QFVESARYQH ALETELSRTI NTLRPVRDSR VHLAIPKPSA FTRQRDVASA
SVTLELRGGQ QLERSQVDAI VHMVAASIPD LAPERVTVVD QSGRMLSVSD PNSEAAVNAA
QFEQVRRQET SFNQRIRELL EPMTGPGRVN PEVSVDMDFS VTEEARELYN GEPQKLRSEQ
MSENSTTTPG PQGVPGATSN SPPGQAAAPA TAQTPTESSK NATRNYELDR TLQHTRQPAG
RIKRVSVAVL VDNVPRAGAN GKVAPQPLSA AELTRVEALV KQAVGFNAER GDTVSVMNAP
FVRDTTPVEG PAWWELPWVH DAGRMLLGAV VVLALLFGVL RPALRAITGQ NKKNDEQALE
PHTADVQLVD DDGMPLPALG ADRASLGGPD ALALPVDSYE ERLRMAREAV KTDSKRVAQV
VKGWVAND
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