Gene Smal_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1878 
Symbol 
ID6475903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2115909 
End bp2116550 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID642731060 
Productflagellar assembly protein FliH 
Protein accessionYP_002028265 
Protein GI194365655 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.479163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.528624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACG TCGTGCGCTG GCTTGCCCCG GACCTGCTGG CCCCGCCCGA ACCGGCGCTG 
GACCAGGAGA GCGCGTTCGA ATTCACCGAG CCGGACCCGG AGCACGAACC GGAACCGCCG
CTGCACCTGC CCACCCTGGA AGAAATCCAG GCGATCCAGG ACAGTGCCGA GAAGGAAGGC
TTCCAGCACG GCCATGCGGA TGGCTACGGC CAGGGTCAGG CCGAGGTGCG TCGCCTCGCC
GCGCAGATCG AGGGCATTCT CGACAACTTC AGCCGCCCGC TGGTGCGACT GGAAAACGAA
GTGGTCGGTG CGCTGGGCGA GCTGGCGGTA CGCATCGCCG GTGCGCTGGT CGGCCGTGCC
TACGAGACCG ATCCGGAGCT GTTGGCGCAG CTGGTCGGTG AAGCCATCGA CGCGGTCGGT
GGCAGCACCC GCGAAGTGGA AGTGCGCCTG CACCCGGACG ACATCGCCGC GCTCGCTCCC
CTCCTGAACC TGTCGCCGCA GCAGCGCCTG GTACCCGATA CCAGCCTCAG CCGTGGCGAC
CTGCGCGTGC ATGCCGAAGC GGTGCGCATC GACGGCACCC TCGAAGCCCG CCTGCGCGGC
GCGCTGGACG CTGTGATCCG CCAGACCGGA GCAGGCGCAT GA
 
Protein sequence
MSNVVRWLAP DLLAPPEPAL DQESAFEFTE PDPEHEPEPP LHLPTLEEIQ AIQDSAEKEG 
FQHGHADGYG QGQAEVRRLA AQIEGILDNF SRPLVRLENE VVGALGELAV RIAGALVGRA
YETDPELLAQ LVGEAIDAVG GSTREVEVRL HPDDIAALAP LLNLSPQQRL VPDTSLSRGD
LRVHAEAVRI DGTLEARLRG ALDAVIRQTG AGA