Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1862 |
Symbol | |
ID | 6475887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2099459 |
End bp | 2100202 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642731044 |
Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
Protein accession | YP_002028249 |
Protein GI | 194365639 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.347265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGCG CAGCCCAGTA CAGGGAAGTG CAGCGCTCGG CGGCGAACGA AGTCATCGCC CAGCATTCGG ACCTGGTGCG GCGCATCGCC CACCACCTGG CCGCGCGCCT GCCAGCCAGC GTCGAGGTCG ACGACCTGAT CCAGGCCGGA ATGATGGGCC TGATCGAAGC CTCGCGCAGC TACGACGCGG ACCAGGGCGC CTCGTTCGAG ACCTACGCGT CGATCCGCAT CCGCGGCTCG ATGATCGACG AGATCCGCCG TGGCGACTGG GTGCCCCGCT CGGTGCACCG CCGCGCTCGT GATGCCGCCG CCACCATCCG CCGCCTGGAG CAGAGCAGCG GCCGCGCCGC CAGTGCCACC GAAGTGGCCG CGGCGATGGA AATGCCGCTG CCCGAATACC TGAGGCTGAT GGAAGACGCC GCACGTGGCC AGGTGCTGAG CCTGGAGTCG CGCATCGAAG ACCAGGGCGA GCTGGACACG GTCACCCAGG GTGGCCCGAC CCCGCAGCAG GTGCTGGAGC GCGGCGAGTT CGGCCGCGAG CTGGGCAAGG CGATCGGCCA CCTGCCCGAG CGCGAGCAGC TGGTGCTGTC GCTCTACTAC GAGCAGGAGC TGAACCTGAA GGAGATCGGC GCGGTGCTTG GCGTGAGTGA ATCGCGGGTC TGCCAGATCC ACGGCCAGGC AGTGCTGCGC CTGCGTGGTC GACTGAAGAA TTTCGAGGCG GCGGACGCCG GCCTGGAAGA ATGA
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Protein sequence | MKGAAQYREV QRSAANEVIA QHSDLVRRIA HHLAARLPAS VEVDDLIQAG MMGLIEASRS YDADQGASFE TYASIRIRGS MIDEIRRGDW VPRSVHRRAR DAAATIRRLE QSSGRAASAT EVAAAMEMPL PEYLRLMEDA ARGQVLSLES RIEDQGELDT VTQGGPTPQQ VLERGEFGRE LGKAIGHLPE REQLVLSLYY EQELNLKEIG AVLGVSESRV CQIHGQAVLR LRGRLKNFEA ADAGLEE
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