Gene Smal_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1846 
Symbol 
ID6475871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2079329 
End bp2081596 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content66% 
IMG OID642731028 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002028233 
Protein GI194365623 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.422723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.381468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTC TGCATCGCTG GCAACACTAC TTCAGCAACC TCTCCGTCCG GCGCAAGCTC 
AACCTGCTGA CGCTGCTCAT CGCGCTCGGC GTGATCGCGC TGTCGGTGAT CGCCGCCCGC
ATGCAGTACC TGGACCTGAC CGAGACCCGC AAGACCGCGC TGAAGACCCA GGTCGAACTG
AGCGATGGCA TCCTCCAGCA CTACCATCGC CTGGCCGGCA CCGGCGAGCT CAGCGAGGAG
GCTGCCAAGA CCGCTGCCCT GCAGGCGCTG GAAGTGATGC GCGCCGAGAA CGACACCTAT
TACTACAACG TCTACGACAC CGGCTATCGC CTGTTGATGC ACCCGTTCCG CAAGGACCTG
GTCGGCAAGG ACATGAAGGA CTTCCGCACC GACGACGGCG TGCGCATCTA CTACGACCAG
GTCGAGGCGG CCAAGGCCGG CGGCGGCTTC GTCAACTACC GCTGGGCCAA GCCGGGCAGC
AAGGGCGACG TCGAGAAGGT GGCCTACGCC AGCCTGTTCG CACCCTGGAA CTGGGTGATC
AGCAGCGGCG TCTACATGGA TGACGTTCAG AAGCAGGCGC TGGTGTTCAC CGCCATCATG
GCCCTCTCCG GCGGCGTGCT GGTGCTGATC GTGCTGGCCC TGAGCTGGGT CATCGGCAAC
CGCATCGCCG TGCCGCTGAA GCAGGCCACC GCCGTCGCCG AAGGTATCGC CGCCGGCAAG
CTCGACAGCC ATATCGGCCC GCAGCCGCAT GATGAAACCG GCCGCCTGCT GGAGGCGATG
GCCGGCATGC AGCAGCAGCT GCACGCGGTG ATCGGCGGCC AGCGCGAAAT GGCCCGCCGC
CACGACGGTG GCGAGCTGAG CTACCGCATC GATGCCAGCG CCTTCCCCGG CGAATACGGG
CTGATGGTGC AGGAAACCAA CGCCCTGGTC GGTGGCCATG TGCAGACCCT GCACGATGTA
CTGGAGGTCG TGCAGCAGTA CGCAGTCGGC GACCTCAGCC GTGACATCGC ACGCTACCCG
GGCGAGAAGG CGGTGATGAC CACCACCGTC GATACGGTCA AGGCCAACCT TGGCCGCATC
AACGCCGAGA TCAAGCAGTT GGCCAGTTCC GCCGCCGCCG GCGACTTCAG CCGTCGTGGC
GACGCGCAGG GCTTCGACCA CGATTTCCGC CTGATGCTGG AAAACCTCAA CGCGATGATG
GCGGTCAGCG ATGACAACCT CGGCAAGCTC TCGCAGCTGC TGTCGGCCAT CGCCGAAGGC
GACCTGACCG CACGCATGCA TGGCGATTAC CAGGGCGTGT TCGCGCGCAT GCGTGACGAT
GCCAACACCA CCGTCACCCA GCTGACCCAG ATCGTCGGCC AGATCCAGGC CAGCACGTCC
AGCATCACCC TCGCCGCTGG TGAGATCGCG TCGGGCAACA GCGACCTGTC GCGCCGTACC
GAGCAGCAGG CTGCCAATCT GGAAGAAACC GCGGCCTCGA TGGAGGAGCT GACCTCCACC
GTGCGCCAGA ACGCCGAGCA TGCCCGCCAG GCCAACCAGC TCGCCATCGG CGCGCAGGGT
GTGGCCTCGC AGGGTGGCAG CGTGGTCGGC CAGGTGGTCA ACACCATGTC GGCCATCGAA
GCCTCGTCGA AGAAGATCGC CGAGATCATC AGCGTCATCG ATGGCATCGC CTTCCAGACC
AACATCCTGG CGCTGAACGC CGCAGTGGAA GCCGCACGTG CCGGCGAACA GGGCCGTGGC
TTTGCCGTGG TCGCCAGCGA AGTGCGCACC CTCGCCCAGC GCTCGGCCGC CGCCGCCAAG
GAGATCAAGG GCCTGATCGA TGACTCGGTC GGCAAGGTCG CCGAGGGCTC CAGCCTGGTC
CACCAGGCCG GCAGCACCAT GGCCGAGATC GTCGCCTCGG TGCAGCGCGT GACCGACATC
ATGGCCGAGA TCTCCGCGGC CTCGCAGGAG CAGTCGGCCG GCATCGAGCA GGTCAACCAG
ACCGTGGTGC AGATGGACGA AACCACCCAG CAGAATGCTG CGCTGGTGGA AGAAGCCACC
GCCGCCGCAC GTGCGATGGA AGAACAAGCT GGCCAGCTGG CCGACGCCGT GGCGATCTTC
CGCCTGGACA ACCAGGTCTC CGCCGCGATG AAGGCAGTGG CCGCGCGTGT CGAGCCAGCC
ACCACCGCAG CGGTTGCGCC GCGTCCGCAG GTCGCACCGG CACCACTGCG TCGCAGCAGC
AACGCCAGCA CCTTCGTCGC CAGCGACAGC GACTGGCAGG AATTCTGA
 
Protein sequence
MNLLHRWQHY FSNLSVRRKL NLLTLLIALG VIALSVIAAR MQYLDLTETR KTALKTQVEL 
SDGILQHYHR LAGTGELSEE AAKTAALQAL EVMRAENDTY YYNVYDTGYR LLMHPFRKDL
VGKDMKDFRT DDGVRIYYDQ VEAAKAGGGF VNYRWAKPGS KGDVEKVAYA SLFAPWNWVI
SSGVYMDDVQ KQALVFTAIM ALSGGVLVLI VLALSWVIGN RIAVPLKQAT AVAEGIAAGK
LDSHIGPQPH DETGRLLEAM AGMQQQLHAV IGGQREMARR HDGGELSYRI DASAFPGEYG
LMVQETNALV GGHVQTLHDV LEVVQQYAVG DLSRDIARYP GEKAVMTTTV DTVKANLGRI
NAEIKQLASS AAAGDFSRRG DAQGFDHDFR LMLENLNAMM AVSDDNLGKL SQLLSAIAEG
DLTARMHGDY QGVFARMRDD ANTTVTQLTQ IVGQIQASTS SITLAAGEIA SGNSDLSRRT
EQQAANLEET AASMEELTST VRQNAEHARQ ANQLAIGAQG VASQGGSVVG QVVNTMSAIE
ASSKKIAEII SVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVASEVRT LAQRSAAAAK
EIKGLIDDSV GKVAEGSSLV HQAGSTMAEI VASVQRVTDI MAEISAASQE QSAGIEQVNQ
TVVQMDETTQ QNAALVEEAT AAARAMEEQA GQLADAVAIF RLDNQVSAAM KAVAARVEPA
TTAAVAPRPQ VAPAPLRRSS NASTFVASDS DWQEF