Gene Smal_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1823 
Symbol 
ID6475776 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2047832 
End bp2048957 
Gene Length1126 bp 
Protein Length374 aa 
Translation table11 
GC content64% 
IMG OID642731005 
Productpeptide chain release factor 2 
Protein accessionYP_002028210 
Protein GI194365600 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.366518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.288697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TGAATCCTGT CCGCCAGCGC ATCACCGATC TGACCGATCG CGTGCTGTCG 
CTTCGGGGGT ATCTTTGACT ACGACGCCAA GAAAGAGCGT CTTGAAGAAG TAACGCGGGA
GCTGGAAAGC CCCGACGTCT GGAACAACGC CGAATACGCC CAGAACCTGG GCCGCGAGCG
CTCCAGCCTG GAAAAGACCG TGGGCGGCAT CGCCTCGGTG CTGGACGGCC TGGCTGATGC
CACCGAACTG CTTGAGCTGG CCGAGTCCGA GCAGGACGAG GACACCGCAC TGGCCGTGGT
GGCCGACCTG GACAAGCATC AGGCGCATGT GGAGAAGCTG GAGTTCCAGC GCATGTTCTC
CGGCGAGATG GACAACGCTG CTGCCTTTGT CGACATCCAG GCCGGTGCCG GTGGCACCGA
AGCCCAGGAC TGGGCCGAGA TCCTGCTGCG CATGTACCTG CGCTGGTGTG AATCGCGCGG
CTGGAAGACC GAGCTGATGG AAGTCTCCGG TGGCGACGTC GCCGGCATCA AGTCGGCCAC
GCTGCGCGTG GAAGGCGACT ATGCCTATGG CTGGCTGAAG ACCGAGACCG GCGTGCACCG
CCTGGTGCGC AAGTCGCCGT TCGACTCGGA CAACCGCCGC CACACCAGCT TCACCTCGGT
GTTCGTGTCG CCGGAAATCG ACGACAACAT CGACATCACC ATCAACCCGG CCGACCTGCG
TACCGACGTG TACCGTTCGT CCGGTGCCGG TGGCCAGCAC GTGAACAAGA CCGAGTCGGC
GGTGCGTATC ACCCACATCC CGACCAACAT CGTCGTGGCC TGCCAGACCG GCCGCAGCCA
GCACCAGAAC CGTGACAACG CGATGAAGAT GCTGGCCGCC AAGCTGTACG AGCTGGAGAT
CCAGAAGCGC AACGCCGAAA AGGACGCCGT GGAAGCCACC AAGTCCGACA TCGGCTGGGG
CAGCCAGATC CGCAATTACG TGCTCGACCA GAGCCGTATC AAGGACCTGC GCACGGGCAT
CGAGCGTTCG GATACGCAGA AGGTGCTCGA CGGCGACCTG GACGAGTTCG TCGAAGCCAG
CCTGAAGGCC GGCCTGGCCG TGGGCTCCAA GCGCGTCGAT GCCTGA
 
Protein sequence
MIELNPVRQR ITDLTDRVLS LRGYLDYDAK KERLEEVTRE LESPDVWNNA EYAQNLGRER 
SSLEKTVGGI ASVLDGLADA TELLELAESE QDEDTALAVV ADLDKHQAHV EKLEFQRMFS
GEMDNAAAFV DIQAGAGGTE AQDWAEILLR MYLRWCESRG WKTELMEVSG GDVAGIKSAT
LRVEGDYAYG WLKTETGVHR LVRKSPFDSD NRRHTSFTSV FVSPEIDDNI DITINPADLR
TDVYRSSGAG GQHVNKTESA VRITHIPTNI VVACQTGRSQ HQNRDNAMKM LAAKLYELEI
QKRNAEKDAV EATKSDIGWG SQIRNYVLDQ SRIKDLRTGI ERSDTQKVLD GDLDEFVEAS
LKAGLAVGSK RVDA