Gene Smal_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1800 
Symbol 
ID6475753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2021793 
End bp2022689 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID642730982 
Productpyruvate carboxyltransferase 
Protein accessionYP_002028187 
Protein GI194365577 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0874728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT ACGTCCGCAT CGTCGAGGTC GGCCCGCGTG ACGGCCTGCA GAACGAAAAG 
CAGTCGGTCT CCACCGCCGA CAAGATCGAA CTGATCAATC GCCTGTCGGC CACTGGCCTG
CGCAGCATCG AGGCGACCAG CTTCGTCAGC CCAAAGTGGG TCCCGCAGCT GGCCGACGCC
GCCGAGGTCT ATGCCGGCAT CCAGCGCCGG CCGGGCATCC ACTACCCGGT GCTGGTCCCG
AACGAACAGG GTTACGACCG CGCCCGTGCG GTGGGCGTGG AAGAAGTGGC GGTGTTCACC
GCCGCCTCTG AGGCGTTCAA CCGCACCAAC ACCAATGCCG GCATCGACGA GTCGCTGGCC
CGCTTCGAGC CGATCCTGCG CCGCGCCGCC GCCGATGGCG TGCGCGTGCG TGGCTACGTC
TCCACCGTGC TCGGCTGCCC TTATCAGGGC GAGGTACCGC TGGCCGACGT GGTGCGCGTG
GCACGCGCCC TGCACCAGAT GGGCTGTTAC GAAATCTCGC TGGGCGACAC CATCGGCGTC
GGTACCCCGC GCAAGGCACG GGCGATGCTG CAGGCGGTTG CCGCCGAGAT CCCGATGGAT
GCACTGGCCG TGCACTTCCA CGACACCTAT GGCCAGGCCA TCGCCAACAT CGCCACCTGC
CTGGAAGAAG GCGTGCGCGT GGTCGACAGC GCCGTCTCCG GCGCCGGTGG CTGCCCGTAT
GCCAAGGGGG CCAGCGGCAA CGTCGCCAGC GAGGACGTGG CCTACCTGCT GCAGGGCCTG
GGCCTGGACA GCGGCGTGGA CCTGCCGGCG CTGGCCGAGA CCGGTCGCTG GCTGGCCGGC
CTGCTCGGCC GCGCCACTGC CAGCCGCACC GGGCAGGCGT TGGCCGCGGC CGGTTGA
 
Protein sequence
MSDYVRIVEV GPRDGLQNEK QSVSTADKIE LINRLSATGL RSIEATSFVS PKWVPQLADA 
AEVYAGIQRR PGIHYPVLVP NEQGYDRARA VGVEEVAVFT AASEAFNRTN TNAGIDESLA
RFEPILRRAA ADGVRVRGYV STVLGCPYQG EVPLADVVRV ARALHQMGCY EISLGDTIGV
GTPRKARAML QAVAAEIPMD ALAVHFHDTY GQAIANIATC LEEGVRVVDS AVSGAGGCPY
AKGASGNVAS EDVAYLLQGL GLDSGVDLPA LAETGRWLAG LLGRATASRT GQALAAAG