Gene Smal_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1655 
Symbol 
ID6475525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand- 
Start bp1865721 
End bp1866389 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID642730837 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002028043 
Protein GI194365433 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.721526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.229233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC CCGCCCACTT CTCGACCAAG GACCGGATCC TCGGCGCCGC CGAGGAGCTG 
TTCGCCCAGC ACGGCTTCGC CGGCACCTCC CTGCGCCAGG TCACCAGCCA GGCCGACGTC 
AACATCGCTG CGGTGAACTA CCACTTCGGT TCCAAGGAAA ACCTGGTCAA CGAGGTGTTC 
CGCCGCCGCA TGGACGAGAT GACCGGCGCC CGCCTGTCGC AGCTCGAGCG CGCCCGCACC 
GAGCACCCCG GCCAGCTGCG CCCGGTGCTG GCCGCCTTCG TCGAGCCTGC GCTGGCGATG 
GCCCAGGACC GCCAGAGCGG CGGCGCCTTC GTGCGCGTGA TCGCCCGCGC CTACGCCGAG 
AAGAACGACA ACCTGCGCAA GTTCCTGTCC GACCATTACG GCCATGTGCT GCGCGCGTTC 
GGCAAGGCCA TCGCCGAATG CGTGCCCGGC CTGAGCAAGG AAGAGCTGTA CTGGCGCCTG 
GATTTCCTGG CCGGCTCGCT CACCTATGCC ATGGCCGACT TCGGGCTGAT CAAGCGTCCC 
GCCGGTGTCA CCGAAGCGGC GCATCGTGCC CATGCCGCCC ATGAACTGAT CCATTTCGCC 
GAGGCCGGGT TCCGCGCCGC CGCACGCAGC GGCAGCGCCC TGCCCGCCTC CATTGATTCC 
ACCCAGTAA
 
Protein sequence
MAKPAHFSTK DRILGAAEEL FAQHGFAGTS LRQVTSQADV NIAAVNYHFG SKENLVNEVF 
RRRMDEMTGA RLSQLERART EHPGQLRPVL AAFVEPALAM AQDRQSGGAF VRVIARAYAE 
KNDNLRKFLS DHYGHVLRAF GKAIAECVPG LSKEELYWRL DFLAGSLTYA MADFGLIKRP 
AGVTEAAHRA HAAHELIHFA EAGFRAAARS GSALPASIDS TQ