| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1651 |
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| Symbol | |
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| ID | 6475521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1858714 |
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| End bp | 1860627 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642730833 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_002028039 |
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| Protein GI | 194365429 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.449332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.072002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCAC CCTGGCGGGA CAGAATCCTC GGCCTGATGC CGCGTTCGGC CATCGTCTGC
CACGACCTCT TCATGGTCTG GGCATGCTGG CAGCTGCTCC ATGCGGGGCG CTACTCGATC
CTTCCCAACG CGCCCGCGCT TCCCCTGTGG AATGTCGACA CCACCCTGGT ACTGCTGCTG
CAGGGCCTGG TGTTCTGGCG CGTTGGCCTG TATCGCGGGC TGTGGCGTTT CGCCAGCGTC
AGCGACCTGC TGAACATCTT CAAGGCCAGC TTCATCGGCA TGGTCGCCAT CGTGCTGGTG
CTGATGTGGA AGCGCTTCGA TGGCGTGCCG ATGTCGGTGC TGGTGATCTA TCCGTTCGCG
CTGTCGGCGC TGCTGGGCGC GCCGCGGTTG CTGTACCGGG CATGGAAGGA CTACCAGTCG
CTGCAGTCGG ATTCGTCCGC GCGGCGCGTG TTGATCCTGG GTGCCGGCCA GGCCGCTGAG
ACCCTGGTCC GCGACCTGCG CCGGTCGGGC AACTTCGAAC CGGTGGGCCT GCTGGATGAT
GCGCCCCACC TGCGCGGGGC CAAGCTGCAG GGCCTGCCCA TCCTGGGTGG CCTGGACGAC
GCGCCGGCAG TAGTGCGCGA AACCGCGGCC AAGCTGCTGG TGATTGCGAT GCCCTCGCTT
GACGCTGCAG GCATGCAGCG CGTGGTCGCC ATCTGTGAAA GCACCGGCGT ACCATTCCGC
ACCGTGCCAA AGCTCAGCGA CATCCTGCAG GGCCAGTCGC TGCCAGGGCA GTTGAAGGAA
GTGGCGATCG AGGACCTGCT CGGTCGCAAG CCGATCATGC CGGACTGGAA CCTGATCCGC
GGCTGGTTGG GCGGGCGTAC GGTGATGGTC ACCGGTGCCG GTGGCTCGAT CGGCTCGGAG
CTGTGCCGCC AGTGCGCGCG CCACGGCGCC GGCCGCATCA TCCTGCTGGA GATCAGCGAG
CTGCTGTTGC TGACCATTGA AGGTGAACTG CGCCGCAGCT TCCCTGATGT CGAGGTCGAA
GCGGTACTGG GTGACTGTGG CGACCCGGCG GTGATCCGCC ACGCGTTGTC GCTGCATCCG
GTCGATACCG CGTTCCACGC CGCTGCCTAC AAGCATGTGC CGGTGCTGGA GCGCCAGCTG
CGCGAAGCGG TACGCAACAA CATCCTGGCC ACCGAGAACG TGGCCCGTGC CTGCATGGAG
GCACGCGTCG AGCATTTCGT GTTCATCTCC ACCGACAAGG CAGTGGACCC GGTCAACGCA
CTGGGCGCCA GCAAGCGCTA CGCCGAGATG ATCTGCCAGA GCCTGGACCA GAAGTCCACG
CACACCCGGT TCGTCACCGT GCGCTTCGGC AACGTGCTGG CCTCGGCCGG CAGCGTGGTG
CCGTTGTTCC GCGAGCAGAT CCTGCGCGGC GGGCCGGTCA CCGTCACCGA CCCGGAAGTC
AGCCGCTACT TCATGACCAT TCCGGAGGCC TGCCAGCTGA TCCTGCAGGC CGCTGCGTCG
GCGTCGCATG GTGCGATCTA CACGCTCGAC ATGGGCGAGC CGGTGCCGAT CCGCGTGCTG
GCCGAACAGA TGATCCGCCT GGCCGGCAAG CAGCCGTACA AGGACGTCCA GATCATCTAC
ACCGGCCTGC GCCCGGGCGA GAAGCTGCAC GAGACGCTGT TCTATTCGGA CGAGGACTAT
CGTTCGACCG CACACCCGAA GATCCTTGAG GCCGGTGTGC GCACGTTCGC GCGCGATGTG
GTGCTGGGCA ATGTCCCGCG CCTGCGCGAG GCGGTGTGCA GCTACGACAC GACCAGCATC
CAGGAGATCC TGTTCGCGAC GATGCCGGAG TTCTCTCCCA TCGAACAGGA TGCTTACATT
TCATCCGCTA AAGTTGTGCC CTTTCCGGCA CGTGAGGCCA ACAGGCACCA ATGA
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| Protein sequence | MASPWRDRIL GLMPRSAIVC HDLFMVWACW QLLHAGRYSI LPNAPALPLW NVDTTLVLLL
QGLVFWRVGL YRGLWRFASV SDLLNIFKAS FIGMVAIVLV LMWKRFDGVP MSVLVIYPFA
LSALLGAPRL LYRAWKDYQS LQSDSSARRV LILGAGQAAE TLVRDLRRSG NFEPVGLLDD
APHLRGAKLQ GLPILGGLDD APAVVRETAA KLLVIAMPSL DAAGMQRVVA ICESTGVPFR
TVPKLSDILQ GQSLPGQLKE VAIEDLLGRK PIMPDWNLIR GWLGGRTVMV TGAGGSIGSE
LCRQCARHGA GRIILLEISE LLLLTIEGEL RRSFPDVEVE AVLGDCGDPA VIRHALSLHP
VDTAFHAAAY KHVPVLERQL REAVRNNILA TENVARACME ARVEHFVFIS TDKAVDPVNA
LGASKRYAEM ICQSLDQKST HTRFVTVRFG NVLASAGSVV PLFREQILRG GPVTVTDPEV
SRYFMTIPEA CQLILQAAAS ASHGAIYTLD MGEPVPIRVL AEQMIRLAGK QPYKDVQIIY
TGLRPGEKLH ETLFYSDEDY RSTAHPKILE AGVRTFARDV VLGNVPRLRE AVCSYDTTSI
QEILFATMPE FSPIEQDAYI SSAKVVPFPA REANRHQ
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