Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1631 |
Symbol | |
ID | 6475501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1834978 |
End bp | 1835853 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642730813 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002028019 |
Protein GI | 194365409 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.172115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.256911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA CCTTGCGCCA GCTGCAGGTC TTTGTTGCCA TCGCCGACCA CGGCAGCACC ACTGCCGCCG GCCAGGCCAT TGCGCTCTCG CAGTCGGCCA GCAGCGCCGC CCTGCAGGAG CTGGAGGCGC ACTTCGGCAC CCCGCTGTTC GACCGCATCG GCCGCCGCCT GGCGCTGAAC GGCCACGGCC GCGCCCTGTT GGAACCCGCG CGCACGCTGC TGGTCAACGC CGCCGACCTC GAGCGCCAGC TCGCCGCCGG CGGTGACCCC GCGCAAGGCG CACCACTGCG GCTGGTGCTG GCCGCCAGTA CCACCATCGG CAACTACCTG CTGCCGCCAC GCATCGCCGA ACTGCTGCGG CAGGCGCCAC AGGCCGAGGT CGACCTGCGT ATCGACAACA GTGCCGGCGT GGTCGCCGCC GTGCAGCGCC TGGATGTGGA CGCCGGCCTG ATCGAAGGCC CGTGCCACGA GCGCGGCCTG CAGGTCACGG CCTGGCAGCA GGACCCGTTG GTGATTGTGG CTGCCGCCGA CGCCCCCGCG CGCTGGACGC TGGATCAACT GCGCCGCGCA CGCTGGCTGC TGCGCGAGCC CGGCTCAGGC ACCCGCGAGG CCGTCGAACA GGCGTTGTTG CCGCATCTGC GCGGTTTCGC GCAGACCCTG CAGCTGGGCA ATACCGAAGC GATCAAGCAG GCCGCCATCG CCGGTCTTGG CCTGGCCTGC CTCTCGCGTC ATGCACTGGA AGAGCCGCTG GCTCTCGGCC GCCTGCGCGT GCTCGAGACC CCGTTGCCCG CCCTGCAGCG CACCCTGTGG CTGGTACGTC ACCCGGGCAA GCAATGGTTG CCGGGGTTGC AGGCGTTGTT GGGGGAGGTG CAGTAG
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Protein sequence | MRLTLRQLQV FVAIADHGST TAAGQAIALS QSASSAALQE LEAHFGTPLF DRIGRRLALN GHGRALLEPA RTLLVNAADL ERQLAAGGDP AQGAPLRLVL AASTTIGNYL LPPRIAELLR QAPQAEVDLR IDNSAGVVAA VQRLDVDAGL IEGPCHERGL QVTAWQQDPL VIVAAADAPA RWTLDQLRRA RWLLREPGSG TREAVEQALL PHLRGFAQTL QLGNTEAIKQ AAIAGLGLAC LSRHALEEPL ALGRLRVLET PLPALQRTLW LVRHPGKQWL PGLQALLGEV Q
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