Gene Smal_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1625 
Symbol 
ID6475495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1828346 
End bp1828555 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content60% 
IMG OID642730807 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_002028013 
Protein GI194365403 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.778402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.204275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATC GTCAGACCGG CACCGTCAAG TGGTTCAACG ACGCCAAGGG CTTCGGCTTC 
ATCACCCCGG AAAGCGGCCC GGACCTGTTT GTGCACTTCC GTGCCATCCA GGGCACCGGC
TTCAAGACCC TGCAGGAAGG CCAGAAGGTT ACCTTCATCG CCGTCCAGGG TCAGAAGGGT
ATGCAGGCTG ACCAGGTGCA GGCGGTCTAA
 
Protein sequence
MSDRQTGTVK WFNDAKGFGF ITPESGPDLF VHFRAIQGTG FKTLQEGQKV TFIAVQGQKG 
MQADQVQAV