Gene Smal_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1624 
Symbol 
ID6475494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1827556 
End bp1828044 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content68% 
IMG OID642730806 
Productprotein of unknown function DUF188 
Protein accessionYP_002028012 
Protein GI194365402 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.528791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.239326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAG CTGAAACCCA AGCTGAACAC GCCCGCCCCC GTATCTGGGT GGATGCAGAT 
GCCTGCCCCA CCGTCATTCG CGACATCCTG TTCCGGGCGG CTGAACGGGT CGGGATCGAA
CTGACCCTGG TCGCCAACCA GTGGATCCGT ACCCCGCCCT CACGCTGGCT GCGCTCGATC
CAGGTGCCGC AGGGCCTGGA CGTGGCCGAC AGCGCCATCG TCGAGCGGGT GGCCGCCGGC
GACCTGGTGG TCACCCAGGA CATCCCGCTG GCCGCACTGG TGCTGGAAAA GAAGGCAGTG
GCGCTGAACC CGCGCGGCCA GCTGTACACC CCGAACAACA TGGCCGAACG GCTGTCGATG
CGCAATTTCA TGGAGGAACT GCGCGGCGCC GGGGTACAGA CCGGGGGGCC TCCGCCATTG
GGGCCACGCG ACCGGCAGCT GTTTGCGGCC GAGCTGGACC GCTGGCTGGC GCGGCATCCG
ACTCGCTGA
 
Protein sequence
MTEAETQAEH ARPRIWVDAD ACPTVIRDIL FRAAERVGIE LTLVANQWIR TPPSRWLRSI 
QVPQGLDVAD SAIVERVAAG DLVVTQDIPL AALVLEKKAV ALNPRGQLYT PNNMAERLSM
RNFMEELRGA GVQTGGPPPL GPRDRQLFAA ELDRWLARHP TR