Gene Smal_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1603 
Symbol 
ID6475473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1800979 
End bp1802178 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID642730785 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002027991 
Protein GI194365381 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0711095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCC TGGCTTCCCC CGCAACGACC TCACGCCCGG TGGCTCCCGG CGTGTTGGCC 
GCCATCTCCA CCTCGCATGT CGTCAACGAC ATGATGCAGT CGCTGATCCT GGCCATCTAT
CCGGTGATCA AGGGCGGCTT CAATCTCAGC TTCACCCAGA TCGGCCTGAT CACGCTGACC
TACCAGCTCA CCGCCTCGAT CTTCCAGCCG CTGATCGGCA TCGCCACCGA TCGCCGCCCG
GCGCCGTACT CGCTGCCGAT CGGCATGGCC TCGACCCTGT GCGGCATGCT GCTGCTCGGC
TTCGCGCCGA ACTACACGAT GGTGCTGCTG GCCGCCGCGA TGGTCGGCAT TGGTTCGGCG
ATCTTCCATC CCGAGGCCTC GCGTATCGCA CGCCTGGCAT CGGGTGGCCG ACATGGCTTT
GCACAGTCGG TGTTCCAGGT TGGCGGCAAC TTCGGCACCG CGCTGGGCCC GCTGATTGCC
GCCGCGGTGA TCGTGCCGTA TGGCCAGCAC GCCGCATCGT GGTTTGCTGG CGCTGCCCTG
ATCGGCATCG CATTGCTGAC CTATGTCGGT CGCTGGTACG CGCTGCACCT GGGTACACCG
CGTCCGGCCA GCACCGCATC GATGGCCCCG CGCCATCCGC CGCGCACCGT GGCCAGGGTG
CTGGCGATCC TGCTCGTGCT GATCTTCAGC AAGTACTTCT ACATGGCCAG CATCGGCAGT
TACTTCACCT TCTACCTGAT CCACCACTTC GGCATTCCGG TGGCGCAGGC GCAACTGCAC
CTGTTCGCCT TCCTGGTGGC CTCCGCCGCC GGCGGATTCC TTGGTGGCCC GCTGGGCGAC
CGCATCGGCC GCAAGCCGAT CATCTGGACC TCGATCCTGG GCGTGGCACC GTTCGCGATG
ATGCTGCCGC ATGCCGACCT GCTGTGGACC ACGGTGCTGG CGGTGCTGAT CGGCTTTGTG
CTGTCCTCGG CGTTCTCGGC CATCGTGGTG TATGCGCAGG AGATGATGCC GCACCGCATC
GGCATGGTGT CGGGGTTGTT CTTCGGCTTC GCGTTCGGCA TGGGCGGGCT GGGTGCTGCC
GTGCTCGGCC TGCTGGCGGA CAAGACCAGC ATTGAGTACG TCTACCAGCT GACGGCGTTC
CTGCCGCTGC TCGGTATCGT GGCGGCATGG CTGCCGCCGT CGCGGCCTGC TGCTCACTGA
 
Protein sequence
MSTLASPATT SRPVAPGVLA AISTSHVVND MMQSLILAIY PVIKGGFNLS FTQIGLITLT 
YQLTASIFQP LIGIATDRRP APYSLPIGMA STLCGMLLLG FAPNYTMVLL AAAMVGIGSA
IFHPEASRIA RLASGGRHGF AQSVFQVGGN FGTALGPLIA AAVIVPYGQH AASWFAGAAL
IGIALLTYVG RWYALHLGTP RPASTASMAP RHPPRTVARV LAILLVLIFS KYFYMASIGS
YFTFYLIHHF GIPVAQAQLH LFAFLVASAA GGFLGGPLGD RIGRKPIIWT SILGVAPFAM
MLPHADLLWT TVLAVLIGFV LSSAFSAIVV YAQEMMPHRI GMVSGLFFGF AFGMGGLGAA
VLGLLADKTS IEYVYQLTAF LPLLGIVAAW LPPSRPAAH