Gene Smal_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1576 
Symbol 
ID6475445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1772869 
End bp1773741 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID642730758 
Productchaperone protein HchA 
Protein accessionYP_002027964 
Protein GI194365354 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.44285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC AAGAGCCCAG CCGCCAGCCC AGCCCTGATC CGGCCGAGCG CGACGCCTTC 
TTCCCTTCCC CGTACTCGCT GTCGCAGTTC ACTTCGGCGA AGAGTGACCT GTCCGGCGCC
GACTACCCGG ATGCGCGCCG CGATGGCCGC TGGAAGGTGC TGATGATCAC CGCCGACGAG
CGCTATCTGC CGACCGCCAA CGGCCATCTT TTCTCCACCG GCAACCACCC GGTGGAAACC
CTGCTGCCGA TGTACCACCT CGACAAAGCC GGCTTCGACA TCGATGTAGC CACGCTTTCG
GGCAACGCCG CCAAGTTCGA GTGGTGGGCA TTCCCGCGCG AGGACAAGGA GATCGGCGGA
CTGTATGAGC GCTATGAAGA ACGCTTCCGC CAGCCGCTGC AGCTGGACGA CGTGGTGGCC
GGCCTCGGTC CCGATTCGGA CTACGCAGCG GTATTCATCC CCGGTGGCCA TGGCGCGTTG
ATCGGCCTGC CGGAAAGCCG CGCGGTGAAG GCCACCCTGC AGTGGGCGAT GGCCCAGCAA
CGCCACATCA TCACCCTCTG CCACGGACCT GCTGCGTTGC TGGCCGCGGG CGTCGACGAA
GCCGATGGCG GCTCGCTGTT CCGTGGCTAT CGTATCTGTG CCTTCCCCGA TGCAATGGAC
CGGCAGACAC CCGACATCGG CTACATGCCG GGGCAGCTGC AGTGGTTCTT CGGTGAACGG
CTGGCGCAGC AGGGCGTGCA GATCGTCAAC AAGGGTATCG ATGGCAGCGT CCTGCAGGAC
CGCCTGCTAC TGACCGGCGA CAGCCCGCTG GCCGGCAACG CGCTGGGCAA GCTGGCTGCA
CGCACCCTGC TCGACACTCT GGCCGGGCGC TGA
 
Protein sequence
MNTQEPSRQP SPDPAERDAF FPSPYSLSQF TSAKSDLSGA DYPDARRDGR WKVLMITADE 
RYLPTANGHL FSTGNHPVET LLPMYHLDKA GFDIDVATLS GNAAKFEWWA FPREDKEIGG
LYERYEERFR QPLQLDDVVA GLGPDSDYAA VFIPGGHGAL IGLPESRAVK ATLQWAMAQQ
RHIITLCHGP AALLAAGVDE ADGGSLFRGY RICAFPDAMD RQTPDIGYMP GQLQWFFGER
LAQQGVQIVN KGIDGSVLQD RLLLTGDSPL AGNALGKLAA RTLLDTLAGR