Gene Smal_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1449 
Symbol 
ID6475313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1636806 
End bp1637636 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID642730626 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_002027837 
Protein GI194365227 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.773248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGT GTGGATTCGA GGTCGGGCTG GATCAGCCCC TGTTCCTGAT CGCCGGCCCC 
TGCGTGATCG AGTCGATGCA GCTGCAGCTC GATACCGCCG GCAAGTTGAA GGAAGTCACC
GACAGGCTCG GTGTCAACTT CATCTTCAAG TCCAGCTTCG ACAAGGCCAA CCGCACCTCG
GGCACCGCGT TCCGCGGCCC GGGCATGGAA GAGGGCCTGA AGGTCCTGGC CGAGGTCAAG
AAGCAGATCG GCGTGCCGGT GCTGACCGAC GTCCACGAAT ACACCCCGAT GGATGAAGTG
GCCTCGGTGG TGGACGTGCT GCAGACCCCG GCGTTCCTGG TCCGCCAGAC CGACTTCATC
CGCAAGGTGT GCTCGGCCGG CAAGCCGGTC AACATCAAGA AGGGCCAGTT CCTGGCGCCG
TGGGACATGA AGCCGGTCGT GGAAAAGGCC AAGGCCACCG GCAACGAGCA GATCATGGTC
TGCGAGCGCG GTGCCAGCTT CGGCTACAAC AACCTGGTCA GCGACATGCG TTCGCTGGCG
GTGATGCGCG ATACCGGTTG CCCGGTGGTG TTCGACGCCA CCCACTCCGT GCAGCTGCCG
GGCGGGCAGG GCACCAGTTC CGGTGGCCAG CGTGAGCATG TGCCGGTGCT GGCGCGTGCC
GCCGTGGCGG TGGGCATCTC CGGCCTGTTC GCCGAAACCC ATCCGGACCC GTCCAAGGCG
CTGTCCGATG GCCCCAATGC ATGGCCGCTG GACCAGATGG AAGCCCTGCT CGAGACCCTG
ATGGAGCTCG ATGCGGTGAC CAAGAAGCAC GGCTTCTCGC GCTTCGCGTG A
 
Protein sequence
MKLCGFEVGL DQPLFLIAGP CVIESMQLQL DTAGKLKEVT DRLGVNFIFK SSFDKANRTS 
GTAFRGPGME EGLKVLAEVK KQIGVPVLTD VHEYTPMDEV ASVVDVLQTP AFLVRQTDFI
RKVCSAGKPV NIKKGQFLAP WDMKPVVEKA KATGNEQIMV CERGASFGYN NLVSDMRSLA
VMRDTGCPVV FDATHSVQLP GGQGTSSGGQ REHVPVLARA AVAVGISGLF AETHPDPSKA
LSDGPNAWPL DQMEALLETL MELDAVTKKH GFSRFA