Gene Smal_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1396 
Symbol 
ID6475254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1586766 
End bp1587428 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID642730567 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002027784 
Protein GI194365174 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.739677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGGAAC TGGTCAAGGC CGGTGGCTGG CCGATGGTGC CGCTGCTGCT GTTGGGCGTA 
CTGGCTTTGG CGATCATCCT GGAGCGTTTC TGGTCCCTGC GGCGCACTGA AGTGCTGCCG
CCCGGCCTCG GCCAGGAAGT GCGCAACTGG GCGGCACGCG GCAAGCTCGA CCCGGCACAC
CTGCAGACCC TGCGTGGCAA CTCGCCGCTG GGCGCGCTGC TGGCCGCTGC GCTGGAAGCG
CGCAACCGGC CACGTGACCA GCTCCGTGAA CGCATCGAAG ACACCGGCCG CCACCTGGTG
CACCGCATGG AGCGCTTCCT CAACGCGCTG GGCACCATCG CGTCGGCCGG CCCTTTGCTG
GGCCTGCTGG GCACGGTGAT CGGCATGATC CAGATGTTCC TGGGCATCCT CGACCACGGC
GTGGGTGATG TGAACCAGCT GGCCGGTGGT ATCGGCAAGG CGCTGGTGTG CACCGCCACC
GGCATGATCG TGGCCATTCC GGCACTGATG TTCCACCGCT ACTTCAAGGG CCGCATCCAC
GGCTATGTGG TGGAGATGGA GCAGGAAGCC AGCGCGCTGC TGGATACGCT CGACGGCCGC
CCCGGGGTAT TGAACCCGGC GCCCGCCGCG CGTTCGGCCA ATGCTGCCAC GGCGAAGGCC
TGA
 
Protein sequence
MWELVKAGGW PMVPLLLLGV LALAIILERF WSLRRTEVLP PGLGQEVRNW AARGKLDPAH 
LQTLRGNSPL GALLAAALEA RNRPRDQLRE RIEDTGRHLV HRMERFLNAL GTIASAGPLL
GLLGTVIGMI QMFLGILDHG VGDVNQLAGG IGKALVCTAT GMIVAIPALM FHRYFKGRIH
GYVVEMEQEA SALLDTLDGR PGVLNPAPAA RSANAATAKA