Gene Smal_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1360 
Symbol 
ID6475215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1551672 
End bp1552586 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content69% 
IMG OID642730528 
ProductLytic transglycosylase catalytic 
Protein accessionYP_002027748 
Protein GI194365138 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGGA TACTGGGGAC AACGGCGATC ATCATCGCTG CGCTGACCGC TGCGCCGGCC 
AGCGCCGGCA GCCTGTACAA GTGCCAGGGT GCCGACGGCG TCACCAGTTA TGTCAGCAAG
CGTGTAGCCG GGGCCCGCTG CAGCACCATC AGCTACAGCC GCGATACCCG CCCGGCACCG
CGCCCGGTGG TTTCCGCGCC GAAACCGTCT CCGGCCACCG TGGCCAGCAT CGAGCGCAAT
CCGGTCGCTG TGGCGGCCAG TGCGGCAGCA CCGGCCGTGG CTGGGCCAGC ACCTGCAGCT
GCTCCCGCGC CCCAGGCCAC CCCACGTGGC GGCCGCATGG TCAGCGGGCA GGTCTATTCC
TTCATGAAGG ATGGGGTGCG CCACTACACC AGCGCCCGGC CGACCCAGGT GGCCAATCTC
GGCCCGGTGC GCACCATCCG CTACAGCTTC ATGGAGCGCT GCTACGCCTG CGGGGTCAAC
CCGCGCGTGG ACTTTGGCAC GGTGCGCTTG AACACCACCG CGTTCCAGAG CGAGATCACC
TCGGCCGCAC GCGAGTTCGG CGTCGACGAG GCGGTGGTGC GCGCGATCAT CCATGCCGAG
TCGGCCTACA ACCCGACCGC GCTCAGCCGC GCGGGTGCGC AGGGCCTGAT GCAGCTGATG
CCGCCCACCG CCGCCCGCTT CGGGGTCGGT GATTCCTACG ATGCCGGGCA GAACATCCGC
GGCGGCGTGC AGTATCTTGC GTGGCTGCTG AAACGCTTCA ATGGCGACCT GACCCTGGCC
GCCGCCGGCT ACAACGCCGG CGAAGGTGCG GTCGACCGCC ACGGTGGCGT GCCGCCTTAC
AGCGAAACCC AGTACTACGT GCGCCGGGTC GGCCAGCTGG CCGAGCGTTA CCGCACCGCC
CTGAGTCACC AGTAG
 
Protein sequence
MKGILGTTAI IIAALTAAPA SAGSLYKCQG ADGVTSYVSK RVAGARCSTI SYSRDTRPAP 
RPVVSAPKPS PATVASIERN PVAVAASAAA PAVAGPAPAA APAPQATPRG GRMVSGQVYS
FMKDGVRHYT SARPTQVANL GPVRTIRYSF MERCYACGVN PRVDFGTVRL NTTAFQSEIT
SAAREFGVDE AVVRAIIHAE SAYNPTALSR AGAQGLMQLM PPTAARFGVG DSYDAGQNIR
GGVQYLAWLL KRFNGDLTLA AAGYNAGEGA VDRHGGVPPY SETQYYVRRV GQLAERYRTA
LSHQ