Gene Smal_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1344 
Symbol 
ID6475199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1535492 
End bp1536424 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content64% 
IMG OID642730512 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002027732 
Protein GI194365122 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG CCGGCCTGAA GCGCTGGCTG CCGGGGCTGC GTGCCACGGT GATCGGCATT 
CCGTACCTGT GGCTGCTGCT GTTCTTCGCA GTGCCGTTCC TGATCGTGCT GATGATCAGC
TTCTCGCACA GCCGGGTCGG CTCGCCGCCG TACACCTGGC TGCTGCAGTA CGTGGACGGC
GCGTTCTCGC TCAAGCTCAA CCTCGAGAAC TACCTGGCCC TGTTCCGCGA CTCGATCTAT
GCGCAGGCCT TCCTGAGTTC GATCAAGATC GCGGCCATCT CCACTTTCCT GACCCTGCTG
ATCGGCTACC CGATGGCCTA TGCCATCGCC CGCCTGTCGC CGGCCGCGCG CAACGTGGCA
ATGATGCTGG TGGTGCTGCC GTCGTGGACC TCGTTCCTGA TCCGCGTGTA TGCGTGGAAG
GCGATCCTGG ACCGCAACGG CCTGCTCGAC CAGTTCCTGC AGTTCACTGG CCTGCAATCG
CTGATGACCA GCATGGGCCT GCCCAAGCTG CAGCTGATCG ACACCCCGAC CGCCGCCTAC
ATCGGCATCG TCTACTGCTA CCTGCCGTTC ATGGTGCTGC CGCTGTACGC CAACCTGGTC
AAGCACGACC ACCGCCTGCT GGAAGCGGCC TACGACCTCG GTGCCAAGCC GTGGCAGGCG
TTCCTGCGCA TCACCCTGCC GCTGTCCAAG GCCGGCATCA TCGCCGGTTG CATGCTGGTG
ATGATCCCGG CGATCGGCGA ATTCGTGATT CCGGAAATGC TGGGTGGCTC GGAAACGCTG
ATGGTCGGCC GCCAGCTGTG GAATGAATTC TTCAACAACC GCAACTGGCC GGGCGCCTCG
GCGATGGCGG TGGCGATGAT CCTGTTGCTG CTGGTGCCGA TCCTGCTGTT CAACCGTTCC
CAGCAGCGCC TGCTGGAAGG GAAGCAGGCA TGA
 
Protein sequence
MSVAGLKRWL PGLRATVIGI PYLWLLLFFA VPFLIVLMIS FSHSRVGSPP YTWLLQYVDG 
AFSLKLNLEN YLALFRDSIY AQAFLSSIKI AAISTFLTLL IGYPMAYAIA RLSPAARNVA
MMLVVLPSWT SFLIRVYAWK AILDRNGLLD QFLQFTGLQS LMTSMGLPKL QLIDTPTAAY
IGIVYCYLPF MVLPLYANLV KHDHRLLEAA YDLGAKPWQA FLRITLPLSK AGIIAGCMLV
MIPAIGEFVI PEMLGGSETL MVGRQLWNEF FNNRNWPGAS AMAVAMILLL LVPILLFNRS
QQRLLEGKQA