Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1344 |
Symbol | |
ID | 6475199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1535492 |
End bp | 1536424 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642730512 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002027732 |
Protein GI | 194365122 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTCG CCGGCCTGAA GCGCTGGCTG CCGGGGCTGC GTGCCACGGT GATCGGCATT CCGTACCTGT GGCTGCTGCT GTTCTTCGCA GTGCCGTTCC TGATCGTGCT GATGATCAGC TTCTCGCACA GCCGGGTCGG CTCGCCGCCG TACACCTGGC TGCTGCAGTA CGTGGACGGC GCGTTCTCGC TCAAGCTCAA CCTCGAGAAC TACCTGGCCC TGTTCCGCGA CTCGATCTAT GCGCAGGCCT TCCTGAGTTC GATCAAGATC GCGGCCATCT CCACTTTCCT GACCCTGCTG ATCGGCTACC CGATGGCCTA TGCCATCGCC CGCCTGTCGC CGGCCGCGCG CAACGTGGCA ATGATGCTGG TGGTGCTGCC GTCGTGGACC TCGTTCCTGA TCCGCGTGTA TGCGTGGAAG GCGATCCTGG ACCGCAACGG CCTGCTCGAC CAGTTCCTGC AGTTCACTGG CCTGCAATCG CTGATGACCA GCATGGGCCT GCCCAAGCTG CAGCTGATCG ACACCCCGAC CGCCGCCTAC ATCGGCATCG TCTACTGCTA CCTGCCGTTC ATGGTGCTGC CGCTGTACGC CAACCTGGTC AAGCACGACC ACCGCCTGCT GGAAGCGGCC TACGACCTCG GTGCCAAGCC GTGGCAGGCG TTCCTGCGCA TCACCCTGCC GCTGTCCAAG GCCGGCATCA TCGCCGGTTG CATGCTGGTG ATGATCCCGG CGATCGGCGA ATTCGTGATT CCGGAAATGC TGGGTGGCTC GGAAACGCTG ATGGTCGGCC GCCAGCTGTG GAATGAATTC TTCAACAACC GCAACTGGCC GGGCGCCTCG GCGATGGCGG TGGCGATGAT CCTGTTGCTG CTGGTGCCGA TCCTGCTGTT CAACCGTTCC CAGCAGCGCC TGCTGGAAGG GAAGCAGGCA TGA
|
Protein sequence | MSVAGLKRWL PGLRATVIGI PYLWLLLFFA VPFLIVLMIS FSHSRVGSPP YTWLLQYVDG AFSLKLNLEN YLALFRDSIY AQAFLSSIKI AAISTFLTLL IGYPMAYAIA RLSPAARNVA MMLVVLPSWT SFLIRVYAWK AILDRNGLLD QFLQFTGLQS LMTSMGLPKL QLIDTPTAAY IGIVYCYLPF MVLPLYANLV KHDHRLLEAA YDLGAKPWQA FLRITLPLSK AGIIAGCMLV MIPAIGEFVI PEMLGGSETL MVGRQLWNEF FNNRNWPGAS AMAVAMILLL LVPILLFNRS QQRLLEGKQA
|
| |