Gene Smal_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1342 
Symbol 
ID6475197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1532685 
End bp1534085 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content69% 
IMG OID642730510 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002027730 
Protein GI194365120 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.883223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGGA TCAAGCACTT GCATGGACCC ACCCTGGTGA TTTCCCCGGA CCGCCCCTCC 
CCTTTCCCGC CCCGCCTGCC GGGCTCCCTG CCTGCAACGC TGCCGCTGGT CATCATCGGC
GCCGGCCAGG CCGGGCTGTC CCTCAGCGCG CTCCTGCAGG AAGCGGGCGT CGAGCATCGT
GTGCTGGAGG CCGAAACCGT GGGCGCCAGC TGGCAGCGGC GCTGGGATTC ATTCCAGACC
AACACCGCCA ACGCGACGAT GGCCCTGCAC GGCCATGCCT ATGCGGGCGA CGACCCGGAA
GGTTTCATGG GGGCCCCCGA GGTGATCCGG CGGCTGCGCG ACTATGCCGA CGAACGTTCG
TTGCCGATCA GCGAAGGTTG TGCGGTTCAG CGGGTCACGC CCGAATCGGG CGGCTATGCC
ATCGAAACCA GCCACGGATT GATCCGCGCT GGGGCGGTTG TGGTCGCCAC CGGCGAGTAC
CGGCGCGCGC GGATGCCCCG GGTCCCGTTC GCGCCCGCGC GGGGTCTGAC GGTGCTGCAC
TCCGGCGACT ACCGCAGCCC CCGCCCGCTG CCCGACGGCG GCGTGCTGGT CATCGGTGGC
GGCCAGTCCG GCGCGCAGAT CGCCCAGGAC CTGCGCGACA GCGGTCGCAG CGTGCACTGG
TCACTGGCCC AGCGGCATTC GCATACCCGC CGGCTGCGCG GCAAGGACTC GATGACCTGG
TGGGACATGG CCGGGCGTAT CCACCAGCAT GTGAGTGAAG CGGCCGCCGT CCTGGCCGGA
GAACCGGATG CGCTGCGCAA GGCCCGTACC GCCGAATTCC CGCTGATTTC CGGCAAGGGG
CGTGCCGGCC TGGGCAGCTC GATCAGCCTG CTGGCGATGC ACCGCGCAGG CATCAGGCTG
CTGGGTCGGT TGCAGGGCTT CGATGGAAAC GTCGCCCGCT TCGCCGATGT GCGCCCGCAG
CTGCGCACCG CGATCGAGGC GACACGGACC GAATATGCCT ATCTCGATTC GCTGGCCAGC
GCGTACTACG CCACGCGGCC CGAACCGCGC ACCGACGATG CCCGCTACAT TCCCGACGAG
GTCTATCTGC ATTGGGAGCC GGACGCCGCC CCGCGTGAAC TGGATCTGCG GACGGAAGGC
ATCCGTTCGG TGGTGCTGGC CACCGGCTTC GTCGCCGAAT GGCCGTGGCT CGACGTGCAG
GGCGTGCTGG ACGCACATGG CTATCCGCTC GGCGAGTTCG GCGTTTCACC GCATCCGGGG
CTGTTCTTCA TCGGCATGCA CAACCTGCAG CGGATGAGTT CGTCGTTCCT GTGCAACGGC
GGTCGCGATG CACGTGACCT GTTGCCGGCG ATCCTGCGGC ACCTTCGCCG GGGCGGCGGT
GCCGCCTCCG GGAAGGGCTG A
 
Protein sequence
MARIKHLHGP TLVISPDRPS PFPPRLPGSL PATLPLVIIG AGQAGLSLSA LLQEAGVEHR 
VLEAETVGAS WQRRWDSFQT NTANATMALH GHAYAGDDPE GFMGAPEVIR RLRDYADERS
LPISEGCAVQ RVTPESGGYA IETSHGLIRA GAVVVATGEY RRARMPRVPF APARGLTVLH
SGDYRSPRPL PDGGVLVIGG GQSGAQIAQD LRDSGRSVHW SLAQRHSHTR RLRGKDSMTW
WDMAGRIHQH VSEAAAVLAG EPDALRKART AEFPLISGKG RAGLGSSISL LAMHRAGIRL
LGRLQGFDGN VARFADVRPQ LRTAIEATRT EYAYLDSLAS AYYATRPEPR TDDARYIPDE
VYLHWEPDAA PRELDLRTEG IRSVVLATGF VAEWPWLDVQ GVLDAHGYPL GEFGVSPHPG
LFFIGMHNLQ RMSSSFLCNG GRDARDLLPA ILRHLRRGGG AASGKG