Gene Smal_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1300 
Symbol 
ID6475155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1483658 
End bp1485067 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content69% 
IMG OID642730468 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002027688 
Protein GI194365078 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0433366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.502899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC TGCGCCACTT CATGTCCTCG ATGGTCGGGC GCTTGTTCGT GATCCTGCTG 
CTGGGCATGA GCGTGGCCGC GATCGGCGCG ACCATGCTGG CCACCTCCAA GCGCCAGCAG
GAATTCGAGC GGCAGAACCT GAACCGCATC GCCGATCGCC TGCAGGGCTA CGTCAACCTG
CTCGATGGCA ACCCCGAACT GCGCGAGCGC CTGCTCGAGA TTGGTGGGCC GAGCGTGCGT
GCGCTGCAAC CGGGTGCACG CCTGGGGCGG GCCGATACCG CGTTGATGGA GGTGCTGGAT
GACCGGCCGG GTCCGGTGTC GCGTGCACAT GTGCACTTCG CCTCGTTCCG TTCCTGCATT
CCCAAGCTGC AGGACCTGCT GCCGCCGCCG CCGCCCGGGC ACCGCAGGCA TCCGCGTGAG
CGTGATCCGG CGTTCATCCC GCCCAAGTGC CGCGCGGTGG ACGTGACCCT CAACGATGGC
ACGCTGCTGA AACTGGCGCT GGATTCGCCG GCCGTGGCGC ACAACGGCAT CCTCGCCGTC
GACCCGTGGT TCCTGACCCT GCTGGTGCTG GCGATCGCCA TATTGGCGTA CATCGTCGCG
CGCATGGCCA GCGCACCGCT GCAGGAGCTG GCTGCAGCGG CGGAAGATCT CGGCGATGAC
CTGCAGCGCG ATCCGCTGCC GCTGCGCGGC CCGCGTGAAG TGCAGCGCGC TGCCGAGGCC
TTCAATGCCA TGCAGCACCG CCTGCAGCGG CACCTGGCCG AACGCACGCA GATGCTGGCG
GCGATCACCC ATGACCTGCA GACGCCTCTG ACCCGGCTGC GCCTGCGCTT GGAGAACGTC
AGTGACGAGA CCCTGCGCGA ACGCCTGATT GGTGACCTGG CGGCGATGCA GGCGCTGGTG
CGCGAAGGCC TGGAGCTGGC CCGCAGCGCT GAGAGTGCCG AGCAGCGCGC CGCGCTGGAC
CTGGATTCGC TGCTGGAAAG CATCGTCGAA GACACGGCCG AGGGCGGTGG CGATGTGGTC
TTCGAAGGCG GCAGCGGGGC GGTGCTGATG CTGCGTCCGC TGGCCATGCA CCGCTTGTTC
TCCAACCTGG TGGACAACGC GGTGATGTAC GCCTACCGGG TGCGGGTACG GGTCGAGCGC
AGTGGTGGCG CAATCACCGT GGTGGTGGCC GATGATGGCC CCGGCCTGGC CGAAGATCAG
CTGGAGGCGG TATTCGACCC CTTCGTGCGG GTGGAGACCT CGCGTTCGCG CGAGACCGGC
GGTGCCGGGC TGGGCCTGAC CATCGCCCGC GCCCTGGCCG AAAAGGATGG TGCTCGCCTG
TGGCTGCGCA ACCGCGCCGA AGGTGGGCTG GAAGCGGTGG TGCAGTGGCC GGCCAGCGCG
CAGGTGACGC CACCGGGGCG CGGCGGCTGA
 
Protein sequence
MKRLRHFMSS MVGRLFVILL LGMSVAAIGA TMLATSKRQQ EFERQNLNRI ADRLQGYVNL 
LDGNPELRER LLEIGGPSVR ALQPGARLGR ADTALMEVLD DRPGPVSRAH VHFASFRSCI
PKLQDLLPPP PPGHRRHPRE RDPAFIPPKC RAVDVTLNDG TLLKLALDSP AVAHNGILAV
DPWFLTLLVL AIAILAYIVA RMASAPLQEL AAAAEDLGDD LQRDPLPLRG PREVQRAAEA
FNAMQHRLQR HLAERTQMLA AITHDLQTPL TRLRLRLENV SDETLRERLI GDLAAMQALV
REGLELARSA ESAEQRAALD LDSLLESIVE DTAEGGGDVV FEGGSGAVLM LRPLAMHRLF
SNLVDNAVMY AYRVRVRVER SGGAITVVVA DDGPGLAEDQ LEAVFDPFVR VETSRSRETG
GAGLGLTIAR ALAEKDGARL WLRNRAEGGL EAVVQWPASA QVTPPGRGG