Gene Smal_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1219 
Symbol 
ID6475071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1385265 
End bp1386743 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content71% 
IMG OID642730384 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002027607 
Protein GI194364997 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.627471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0317838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG CCCTCGCCCT CGACACCGCC GCCTGCGACC GCGCCCGCCT GGCCCGCGAC 
GCACGCTTCG ACGGCGTGTT CTTCACCGCC GTGCGCAGCA CCGGCATCTA TTGCCGCCCC
ATGTGCCCGG CACCGCCGCC GAAGCCGCGC AACATCACTT ACTACCCGAC TGCGGCCGCT
GCCGCGGCAG CCGGTTACCG CCCGTGCCTG CGCTGCCGCC CCGAGCTGGC ACCGCAGGCG
CAGCAGGCAC TGGCCGGGCA GACCGTGCAG CGCGCACTGG CCCTGATCCA TGGTGGCTTC
CTGCAGGAAC AGCCGGTAGC CGACCTCGCA GAGAAGATCG GACTCAGCGC GCGCCAGCTG
CAGCGCCTGT TCGTCGAACA TCTGGGCGCA ACGCCAGGGC AGATCCACGC CACCCATCGC
CTGCTGCTGG CCAAGCAGCT GCTGACCGAG ACCACGCTGC CGGTGACCGA CGTCGCGCTG
GCCGCCGGCT ACAACAGCCT GCGCCGTTTC AATACCGCCT TCCTGCAGGG CTGTGGCATG
GCACCGACGG CACTGCGTCG CCAGCACCAG CCGCTGGCCG CCGACGATGG CTGCCTGGTA
CTGCGTCTGG CATACCGGCC ACCACTGGAT TTCCCACGCA TGCTGGCCTT CCTGCGCAAG
CGCAGCCTGC CCGGCATCGA GCTGATCGGC GAAGACAGCT ACCAGCGCGT GCTCGGCACG
CCGGAGCGCC CCACCCTGCT GCGCGTCACC GCCGACCCGA AGCGCCCGGA ACTGCGCCTG
CAGCTGGGCG CGGTCGATCC GCGCCTGATC CCCGACATCG TCCGCCGTGT GCGTCGCGTA
TTCGATCTGG ATGCCGACCT GCAGCAGGTC CACGCCGCAC TGGATGAGGA ACCCTTGCTG
GCGCGTGGCA TCGCCGAGCG CCCCGGGCTG CGCGTCCCCG GCGGCTGGGA TGGCTTCGAG
GTGGGCGTAC GCGCCGTGCT CGGACAGCAG GTCAGCGTGG CCGCGGCCAC CACCTTCGCG
CGGCGGCTGG TGGATGCCTA TGGCGCACAC CTGCCGGGCA TGCCGCCGGA ATTCGATCGC
CAGTTCCCGG CCCCCGAGCT GCTGGCAGAA GCGCCACTGG AATCGATCGG CCTGCCACGC
AGCCGCGCCG CCACCGTGCG TGCGCTTGCC GCCGCCTGTG CCAGTGGCGC GCTCGACTTC
GGCCCGGGCC AGGCGCTGGA AGAGTTCGTT TCCCGCTGCG TGGCACTACC CGGCATCGGT
CCGTGGACCG CGCAGTACAT CGCCCTGCGC GGGCTCGGCC AGCCCGATGC TTTCCCCGCC
GGCGACCTGG TACTGCAGCA GGTGCTCGGC CATGCACAGG GCCAGCGCCT GAGCGAACGT
GCCACCGAAG CACGCTCGCA ACCGTGGCGC CCTTGGCGCG CCTATGCCGT GCTGCATCTT
TGGCACCTGT CCGGCACTTT CGTTGGAGAA CCGACATGA
 
Protein sequence
MDTALALDTA ACDRARLARD ARFDGVFFTA VRSTGIYCRP MCPAPPPKPR NITYYPTAAA 
AAAAGYRPCL RCRPELAPQA QQALAGQTVQ RALALIHGGF LQEQPVADLA EKIGLSARQL
QRLFVEHLGA TPGQIHATHR LLLAKQLLTE TTLPVTDVAL AAGYNSLRRF NTAFLQGCGM
APTALRRQHQ PLAADDGCLV LRLAYRPPLD FPRMLAFLRK RSLPGIELIG EDSYQRVLGT
PERPTLLRVT ADPKRPELRL QLGAVDPRLI PDIVRRVRRV FDLDADLQQV HAALDEEPLL
ARGIAERPGL RVPGGWDGFE VGVRAVLGQQ VSVAAATTFA RRLVDAYGAH LPGMPPEFDR
QFPAPELLAE APLESIGLPR SRAATVRALA AACASGALDF GPGQALEEFV SRCVALPGIG
PWTAQYIALR GLGQPDAFPA GDLVLQQVLG HAQGQRLSER ATEARSQPWR PWRAYAVLHL
WHLSGTFVGE PT