Gene Smal_1154 details

Gene Information

• Locus tag: Smal_1154
• Symbol: rimM
• ID: 6475006
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Stenotrophomonas maltophilia R551-3
• Kingdom: Bacteria
• Replicon accession: NC_011071
• Strand: +
• Start bp: 1315743
• End bp: 1316255
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642730319
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_002027542
• Protein GI: 194364932
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAGATA ACGAGCGCCG CATCCTGCTG GGCAGGATTG TCGGCGCTTT TGGTGTGCGC 
GGCGAAATAA AGCTCGAGTC CTGGACCGAG CCGCGTTCCG CTATTTTCCG TTACCAGCCG 
TGGATCCTGC GCAGTCCCAA CGGGCAGGAA TCCACGCTTG AAGGCGCCCG TGGCCGCGAC 
AGCGGCAAGC ATCTGGTGGC CCGTTTTCCG GGCATCGAAG ATCGCGATAC GGTCGAGGCG 
ATGCATGGCA CCGAGGTCTA CGTGGCCCGC AGTGCACTGC CACCGCCGAA TGCCGATGAG 
TATTACTGGG TCGACCTTGA AGGCCTGGAT GTGAAGACCA CCGAGGGCGT TGCCCTGGGC 
CAGGTCTCGC ACCTGTTCAG CACCGGCGCC AACGATGTGG TGGTCGTGCG CGGCGATCGT 
GAGCGGATGA TTCCGTTCGT GTTGCCGGAG TTCGTCAAGT CGGTCGACTT CGAGGCCAAC 
CTGGTCGTGG TCGACTGGGA CCCCGAGTTC TGA 

 

Protein sequence

MKDNERRILL GRIVGAFGVR GEIKLESWTE PRSAIFRYQP WILRSPNGQE STLEGARGRD 
SGKHLVARFP GIEDRDTVEA MHGTEVYVAR SALPPPNADE YYWVDLEGLD VKTTEGVALG 
QVSHLFSTGA NDVVVVRGDR ERMIPFVLPE FVKSVDFEAN LVVVDWDPEF