Gene Smal_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1118 
SymboluvrA 
ID6474969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1270240 
End bp1273230 
Gene Length2991 bp 
Protein Length996 aa 
Translation table11 
GC content67% 
IMG OID642730282 
Productexcinuclease ABC subunit A 
Protein accessionYP_002027506 
Protein GI194364896 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGG ATTTCATCCG CATCCGCGGC GCGCGGACGC ACAACCTGAA GAACCTCGAC 
CTCGACCTGC CCCGCGACAA GCTGATCGTG ATCACCGGCC TGTCCGGTTC GGGCAAGTCC
TCGCTGGCGT TCGACACCAT CTATGCAGAA GGCCAGCGCC GCTACGTCGA GTCGCTGTCG
GCCTATGCGC GCCAGTTCCT GAGCGTGATG GAAAAGCCGG ACCTGGACCA CATCGAGGGC
CTGTCCCCGG CGATCTCGAT CGAGCAGAAG TCGACCTCGC ACAATCCGCG TTCGACGGTC
GGCACGATCA CCGAGATCTA CGACTACCTG CGCCTGCTGT ATGCCCGCGT CGGCACTCCG
CGTTGCCCGG ACCATGGCTA TCCGCTGGAA GCGCAGACGG TCAGCCAGAT GGTCGACCAC
GTGCTGACGC TGGATCCGGA GCAGCGCTAC ATGCTGCTGG CGCCGGTCAT CCGCGACCGC
AAGGGCGAGC ACGCCCAGGT GTTCGACCAG CTGCGCGCGC AGGGCTTCGT GCGCGTGCGC
GTGGATGGCG AGCTGTACGA GATCGACGAG GTGCCAGCGC TGGCACTGCG CCAGAAACAC
ACCATCGAAG CGGTGATCGA CCGCTTCCGC CCGCGCGAGG ACATCAAGCA GCGCCTGGCC
GAGAGCTTCG AGACTGCGCT GAAGCTGGGC GACGGCATGG CCTCGGTGCA GAGCCTGGAC
ACTGCCGACA GCACGCCGAC GCTGTTCTCC TCCAAGTATT CCTGCCCGGT CTGCGATTAC
TCGCTGCCGG AGCTGGAACC GCGCCTGTTC TCGTTCAATG CGCCGATGGG CGCCTGCCCC
GGCTGCGATG GCCTGGGCAT GGCCGAGTTC TTCGACCCCT CGCGCGTGGT CGTGCACCCG
GAGCTGTCGC TGGCCGCCGG TGCGGTGCGC GGCTGGGACC GCCGCAACGC CTACTATTTC
CAGCTGATCG CCTCGCTGGC CAAGCACTAC AAGTTCGACG TGGACGCCGC CTGGAACTCG
CTGCCGGCCA AGGTGCAGCA GGCCGTGCTG TACGGCAGCG GCGACGAAAC GATCACCTTC
ACCTACTTCA CCGAAGCCGG TGGCCGCACC CAGCGCAAGC ACCGCTTCGA GGGCATCATT
CCCAACCTCG AACGGCGCTA CAAGGAAACC GAGTCGCCGG CGGTGCGCGA GGAGCTGTCC
AAGTACATCA GCGAACGGCC GTGCCCGGAA TGCAACGGCG CACGCCTGAA CAAGGCCGCG
CGCAACGTGT TCGTGGCCGA CCGCCCGCTG CCCGAGCTGG TGGTGCTGCC GATCGACGAG
GCCCTGAAGT TCTTCAGTGA ACTGAGCCTG CCAGGCTGGC GCGGCGAGAT CGCATCGAAG
ATCGTCAAGG AGATTGGCGA ACGCCTCGGC TTCCTGGTCG ATGTTGGCCT CGATTACCTG
ACCCTGGAGC GCAAGGCCGA CACCCTGTCC GGTGGCGAGG CGCAGCGCAT CCGCCTGGCC
AGCCAGATCG GCGCCGGCCT GGTCGGCGTG ATGTACGTGC TCGACGAGCC GTCGATCGGC
CTGCACCAGC GCGACAACGA ACGCCTGCTC GGCACCCTCA CCCGCCTGCG CGACCTTGGC
AACACGGTGA TCGTGGTCGA GCATGACGAG GACGCGATCC GCCTGGCCGA CTACGTGCTG
GACATCGGTC CGGGCGCGGG CGTGCACGGC GGCGAAATCG TCGGCCAGGG CACCCTGCAG
GACATCCTGG AGGCACCGCG TTCGCTGACC GGCCAGTACC TGTCGGGCAA GCGTGCGATC
GAGATCCCGG CGCGCCGGCA CAAGCCGAAC CCGAAGATGA CGCTGCACCT GCGCGGCGCC
AGCGGCAACA ACCTGAAGGG CGTGGACCTG GCGATTCCGT CGGGCCTGCT GACCTGCGTG
ACCGGTGTGT CCGGCTCGGG CAAGTCGACG CTGATCAACG ACACCCTGTT CTCGCTGGCC
GCCAACGAGA TCAACGGTGC CTCGCACCCG ATCGCCCCCT ACAAGGAGAT CGATGGCCTG
GACCTGTTCG ACAAGGTGGT GGACATCGAC CAGTCGCCGA TCGGCCGCAC CCCGCGCTCG
AACCCGGCCA CCTATACCGG CCTGTTCACC CCGCTGCGCG AACTGTTCGC GCAGGTGCCC
GAAGCGCGTG CACGCGGTTA CTCGCCGGGC CGCTTCAGCT TCAACGTGCG CGGTGGCCGC
TGCGAGGCCT GCCAGGGCGA TGGTCTGATC AAGGTCGAGA TGCACTTCCT GCCGGACGTG
TATGTGCCCT GCGATGTCTG CCACGGCAAG CGCTACAACC GCGAGACGCT CGAGATCGTC
TACAAGGGCT TCAACATCAG CGACGTGCTG GAAATGACCG TCGAGGATGC ACTGAAGCTG
TTCGAGCCGG TGCCGTCGAT CGCGCGCAAG CTGGAAACAC TTGTGGACGT GGGCCTGAGC
TACATCAAGC TGGGCCAGAG CGCGACCACG CTGTCCGGCG GTGAAGCGCA GCGCGTGAAG
CTGTCCAAGG AACTGTCGCG CCGCGATACC GGCCGCACCC TGTACATCCT CGACGAGCCA
ACCACCGGCC TGCACTTCCA CGACATCGAA GCGCTGCTGG GCGTGTTGCA CAAGCTGCGC
GACGAAGGCA ACACGGTGGT GGTGATCGAG CACAACCTGG ACGTGATCAA GACCGCCGAC
TGGATCGTCG ATCTCGGTCC GGAAGGCGGT CATCGCGGTG GCACCATCCT GGTCACCGGC
ACGCCGGAAG ACGTGGCGGC CTGCCCGCAG TCGTATACCG GCCAGTTCCT GGCCCGCATG
CTGCCGTCCA CCAGCGCGCG CCCGGACCAG CCCGCCGCCG TGGCCAACAA GCCCGATGCG
CGCCCGCCGC GCAAGGTCAA GCCGGAGAAG CCGACGAAGA AGGCGGCCGC TGCCAAGAGC
ACCGGCAAGG CCAGCAAGAC CGCTTCGCCC CGCAAGAAGA AGGATGCCTG A
 
Protein sequence
MAMDFIRIRG ARTHNLKNLD LDLPRDKLIV ITGLSGSGKS SLAFDTIYAE GQRRYVESLS 
AYARQFLSVM EKPDLDHIEG LSPAISIEQK STSHNPRSTV GTITEIYDYL RLLYARVGTP
RCPDHGYPLE AQTVSQMVDH VLTLDPEQRY MLLAPVIRDR KGEHAQVFDQ LRAQGFVRVR
VDGELYEIDE VPALALRQKH TIEAVIDRFR PREDIKQRLA ESFETALKLG DGMASVQSLD
TADSTPTLFS SKYSCPVCDY SLPELEPRLF SFNAPMGACP GCDGLGMAEF FDPSRVVVHP
ELSLAAGAVR GWDRRNAYYF QLIASLAKHY KFDVDAAWNS LPAKVQQAVL YGSGDETITF
TYFTEAGGRT QRKHRFEGII PNLERRYKET ESPAVREELS KYISERPCPE CNGARLNKAA
RNVFVADRPL PELVVLPIDE ALKFFSELSL PGWRGEIASK IVKEIGERLG FLVDVGLDYL
TLERKADTLS GGEAQRIRLA SQIGAGLVGV MYVLDEPSIG LHQRDNERLL GTLTRLRDLG
NTVIVVEHDE DAIRLADYVL DIGPGAGVHG GEIVGQGTLQ DILEAPRSLT GQYLSGKRAI
EIPARRHKPN PKMTLHLRGA SGNNLKGVDL AIPSGLLTCV TGVSGSGKST LINDTLFSLA
ANEINGASHP IAPYKEIDGL DLFDKVVDID QSPIGRTPRS NPATYTGLFT PLRELFAQVP
EARARGYSPG RFSFNVRGGR CEACQGDGLI KVEMHFLPDV YVPCDVCHGK RYNRETLEIV
YKGFNISDVL EMTVEDALKL FEPVPSIARK LETLVDVGLS YIKLGQSATT LSGGEAQRVK
LSKELSRRDT GRTLYILDEP TTGLHFHDIE ALLGVLHKLR DEGNTVVVIE HNLDVIKTAD
WIVDLGPEGG HRGGTILVTG TPEDVAACPQ SYTGQFLARM LPSTSARPDQ PAAVANKPDA
RPPRKVKPEK PTKKAAAAKS TGKASKTASP RKKKDA