Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1054 |
Symbol | |
ID | 6478481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1206626 |
End bp | 1207474 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642730218 |
Product | isocitrate lyase family protein |
Protein accession | YP_002027442 |
Protein GI | 194364832 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.138813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.876203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA CACGTCGGCT GCGCGATCTG CTTCGGCAGG GCAGCGTGAT AGCACCGGGC GTATTCGATG GCTTGTCGGC ACGCCTGGTG GAGCTGGCCG GCTTCGATGC GGTATATGCC AGCGGCGGGG CCATCGCACG TTCGGCCGGC GTACCGGACA TCGGCCTGCT CGGTCTCAGC GAAGTGCTTG TGCAGGTTGA ACGGATCGTC GATGCCTGCG ATCTGCCGGT GATCGCCGAC GCTGACACCG GCTTCGGCGG CACCGCGAAT GTTGAACGCA CGGTGCGCGC GTTGGAAAGG GCAGGGGTTG CCGCCCTGCA TATCGAGGAC CAGGCCTTCC CCAAGCGCTG TGGTCACCTG GATGACAAGA CGCTGGTTGA CGCGGGCGAG ATGTGCACGA AGATCCGCGT CGCCTGCCAG TCGCGGATCG ATCCGGAGCT GATGATCATC GCGCGTACCG ACGCCATCGC CTGCGAGGGC CTGGATGCGG CGATCGAACG CGCGCGTGCG TATGTGGAGG CGGGCGCGGA CATGATCTTC GTCGAGGCCC CGGAAACGCT GGAGCAGATC GAGGTGATTT CGCAGCGTGT TCCCGGGCCG AAGCTGATCA ACATGTTCCA CAGCGGCAAG ACGCCGCTGG TGCCGGTGCA GCGGCTTGCC GAACTCGATT ACCGGCTGGT GATCATTCCC TCGGACCTGC AACGGGCTGC GATCCGGGCC ATGCAGCGCA CCCTGCAGGA GATTGCAGCG ACCGGTGACA GCGGGCGTGT CGCCAATGCG CTGGCCAGCT TCAGCGAGCG CGAGGAGATC GTGCGTACCG GTCGTTATCT GGCGCTGGAT CGCGCCTGA
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Protein sequence | MKKTRRLRDL LRQGSVIAPG VFDGLSARLV ELAGFDAVYA SGGAIARSAG VPDIGLLGLS EVLVQVERIV DACDLPVIAD ADTGFGGTAN VERTVRALER AGVAALHIED QAFPKRCGHL DDKTLVDAGE MCTKIRVACQ SRIDPELMII ARTDAIACEG LDAAIERARA YVEAGADMIF VEAPETLEQI EVISQRVPGP KLINMFHSGK TPLVPVQRLA ELDYRLVIIP SDLQRAAIRA MQRTLQEIAA TGDSGRVANA LASFSEREEI VRTGRYLALD RA
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