Gene Smal_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1054 
Symbol 
ID6478481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1206626 
End bp1207474 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID642730218 
Productisocitrate lyase family protein 
Protein accessionYP_002027442 
Protein GI194364832 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.138813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.876203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA CACGTCGGCT GCGCGATCTG CTTCGGCAGG GCAGCGTGAT AGCACCGGGC 
GTATTCGATG GCTTGTCGGC ACGCCTGGTG GAGCTGGCCG GCTTCGATGC GGTATATGCC
AGCGGCGGGG CCATCGCACG TTCGGCCGGC GTACCGGACA TCGGCCTGCT CGGTCTCAGC
GAAGTGCTTG TGCAGGTTGA ACGGATCGTC GATGCCTGCG ATCTGCCGGT GATCGCCGAC
GCTGACACCG GCTTCGGCGG CACCGCGAAT GTTGAACGCA CGGTGCGCGC GTTGGAAAGG
GCAGGGGTTG CCGCCCTGCA TATCGAGGAC CAGGCCTTCC CCAAGCGCTG TGGTCACCTG
GATGACAAGA CGCTGGTTGA CGCGGGCGAG ATGTGCACGA AGATCCGCGT CGCCTGCCAG
TCGCGGATCG ATCCGGAGCT GATGATCATC GCGCGTACCG ACGCCATCGC CTGCGAGGGC
CTGGATGCGG CGATCGAACG CGCGCGTGCG TATGTGGAGG CGGGCGCGGA CATGATCTTC
GTCGAGGCCC CGGAAACGCT GGAGCAGATC GAGGTGATTT CGCAGCGTGT TCCCGGGCCG
AAGCTGATCA ACATGTTCCA CAGCGGCAAG ACGCCGCTGG TGCCGGTGCA GCGGCTTGCC
GAACTCGATT ACCGGCTGGT GATCATTCCC TCGGACCTGC AACGGGCTGC GATCCGGGCC
ATGCAGCGCA CCCTGCAGGA GATTGCAGCG ACCGGTGACA GCGGGCGTGT CGCCAATGCG
CTGGCCAGCT TCAGCGAGCG CGAGGAGATC GTGCGTACCG GTCGTTATCT GGCGCTGGAT
CGCGCCTGA
 
Protein sequence
MKKTRRLRDL LRQGSVIAPG VFDGLSARLV ELAGFDAVYA SGGAIARSAG VPDIGLLGLS 
EVLVQVERIV DACDLPVIAD ADTGFGGTAN VERTVRALER AGVAALHIED QAFPKRCGHL
DDKTLVDAGE MCTKIRVACQ SRIDPELMII ARTDAIACEG LDAAIERARA YVEAGADMIF
VEAPETLEQI EVISQRVPGP KLINMFHSGK TPLVPVQRLA ELDYRLVIIP SDLQRAAIRA
MQRTLQEIAA TGDSGRVANA LASFSEREEI VRTGRYLALD RA