Gene Smal_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1020 
Symbol 
ID6478447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1163744 
End bp1165936 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content68% 
IMG OID642730184 
Producthypothetical protein 
Protein accessionYP_002027408 
Protein GI194364798 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA TCATTTGCCT GACCGCTGCC CTGGGGGCAG CGCTGGGATC GACCGCGCAG 
GCGGCCGACC TGCAATTCGA CGGCCGCCAT GCGCGCGCCG AAGCCGCTGC CAACGGCAGC
TTCGTGCTGC ATGCGCCGAA GGGCGCAGTG CAGATCGCAG CCGCACCGAT GCGCAGCCAG
ACCGGAAGCG TGATGTTCGA TGCACTGTTC GCGCTGGCCC AGCAGGAGAT GGACCAGGAT
CGCGTGGATG CGATCCGCGA TCCTGCATTC GATGAGGGCC GGCCGGTGCC GTGCGAGTGC
TTCCAGACCG GTGCGCGCTG GCCCTACGTG TGGACCCGCG ATGTCAGCTT CGCCGCCGAT
CTGGCGCTGG CGCGGATGGA CCCGCAGCGC ACGCGGCAGT CGCTGCAGTT CAAGCTGTCC
GCAGCGCGCG ACGGGCATAC GCCCGGCCTG TTCGTGGCGC AGGACACCGG TTCCGGTGGC
AGTTGGCCGA TCAGCAGCGA TCGCGTGGTG TGGTTCCTGG CGGCACGTCA CCTGCTGGAG
GATCGCGCGT TTGCCGACCA GGTCTGGCAG GCGCTGCAGG GTACGCTGGC GCAGGACCGC
GCGATGGTGT TCGACGCGCG AATGGGCCTT TATCGTGGCG AGACCTCCTT CCTGGATTGG
CGTGAGCAGA CCTATCCGGA CTGGACCCGC GAGGACGTGC GCTTCATCGG CGATTCCTAT
GCGCTGTCCA CCAACGTGCT GCACTACCAG GCGCTGCGCC TGGCCGAACG CCTGGCTGGC
CAACATGGTG ATGCCCGCGC GGCTGACTAC AAGGCGTGGG CCGATGCGTT GGCGCAGCAG
ATCGATGCGC GCTTCTGGCG CGAGGACATG GGCCAGTACA TGAGCTACAT CGGCGAAGCC
GCGCACCCGG TGCCCTACGC CAAGGTCGAT CTGCTCGGCC TGTCGCTGGG CATCCTCGCC
GAGGTGTTGC CGGCCGAGCG TGCGCGCCGT GCGCTGGCCG CCTACCCGAT GGGGCCGGCC
GGCAGTCCGG TGGTGTGGCC GCAGGAGTCG CAGCAGCCGA TCTACCACAA CCGCGCGATC
TGGCCGTTCG TCAGCGCCTA CTCGCTGCGT GCGGCGCGGC AGCTGGACGA TGCGCCGCGC
ATCGCTGCCG AAATCCGCTC GCTGATGCAG GGCGCGGCGC TGGCCGCTTC CAACATGGAG
AACTACGAGC TGGTCAGCCA GGCCGTGCAT GTCGACGAAG GCGCACTCAG CGGCCCGGTG
GTCAACTCCG AACGCCAGTT GTGGTCGGTG GCCGGCTATC TGTCGATGGT GCTCGAAGGT
GTGTTCGGTG TGCAGGACGA TGGCCGCGTG CAGCCCAAGC TGCCGGTCAC ACTGGTGCCG
GAGCTGTTCG GTACGCAGCG TCGCATCAGC CTGGAGGCCG GTGGCAAGCG CTACGTGCTG
GAGCGCCCGC AGCAGCTGGG TGATGGCCTG CTGGTGGCGG GCAGGACGCT GATCCAGGGC
AACACGACCA CGGTGCAGCT GATGGCTGCA CAGTCCGCGA CCGGCTTCGG TGGCACAACC
GCCGACGCCA ATGCGCGTGC GCCGGCCACG CCGACCGCAC CGCAGGCCAC ACGCAATGGC
GCTGGCTGGA GCGTGCCGGT CACGACTGGG CAGGTTCTGT GGAAGGACGG CAGGGCCGTC
GCCGCCAGCA ATGGCCAGGC GCACATCAGC GACGATGGCC TGCAGCACTG CTTCAGTCTG
ACCCGGCGCG AGGGTGCATT GGAATCGCTG CACAGCCCGA TGCTCTGCGT CGGTCCGCAG
CAGGTGCTGA AGGGCGAGGA ACGCTGGCAG TTCACCGCGG CCCAGGCCGG GCAGGTGGGC
CTGCGCCTGC AGTACAGCAA TGCGAACGGG CCGATCAACA CCGGCGTCAC GGCTGCGGTC
AAGCAGCTGG TTCTGCAGTG CCCGGGCCAG CCATTGCAGC GGCATACGGT CACCCTGCCG
CACAGCGTGG CGGTGCAGGA TTCGACCTCG GCAACATTCG CGGTGCCCAA GGGGCGGTGC
ACGGTCACGC TTGAAGAGGG CTTCAACATG AGCGCGCTGC AGCACTTCGC GCACTACACC
GGCGGCAAGG GCGGGCGTGA TGGTGTGCTC AACCAGGCCC AGGTGCAGGC ACTGACGGTG
GCGCCGGTGG CGATGGAAGA GGGCGCACGA TGA
 
Protein sequence
MLKIICLTAA LGAALGSTAQ AADLQFDGRH ARAEAAANGS FVLHAPKGAV QIAAAPMRSQ 
TGSVMFDALF ALAQQEMDQD RVDAIRDPAF DEGRPVPCEC FQTGARWPYV WTRDVSFAAD
LALARMDPQR TRQSLQFKLS AARDGHTPGL FVAQDTGSGG SWPISSDRVV WFLAARHLLE
DRAFADQVWQ ALQGTLAQDR AMVFDARMGL YRGETSFLDW REQTYPDWTR EDVRFIGDSY
ALSTNVLHYQ ALRLAERLAG QHGDARAADY KAWADALAQQ IDARFWREDM GQYMSYIGEA
AHPVPYAKVD LLGLSLGILA EVLPAERARR ALAAYPMGPA GSPVVWPQES QQPIYHNRAI
WPFVSAYSLR AARQLDDAPR IAAEIRSLMQ GAALAASNME NYELVSQAVH VDEGALSGPV
VNSERQLWSV AGYLSMVLEG VFGVQDDGRV QPKLPVTLVP ELFGTQRRIS LEAGGKRYVL
ERPQQLGDGL LVAGRTLIQG NTTTVQLMAA QSATGFGGTT ADANARAPAT PTAPQATRNG
AGWSVPVTTG QVLWKDGRAV AASNGQAHIS DDGLQHCFSL TRREGALESL HSPMLCVGPQ
QVLKGEERWQ FTAAQAGQVG LRLQYSNANG PINTGVTAAV KQLVLQCPGQ PLQRHTVTLP
HSVAVQDSTS ATFAVPKGRC TVTLEEGFNM SALQHFAHYT GGKGGRDGVL NQAQVQALTV
APVAMEEGAR