Gene Smal_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1003 
Symbol 
ID6478358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1142631 
End bp1143098 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content63% 
IMG OID642730167 
Productnuclear protein SET 
Protein accessionYP_002027391 
Protein GI194364781 
COG category[R] General function prediction only 
COG ID[COG2940] Proteins containing SET domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.285499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA AGATCCAAGC CCGCAAGTCC GCCATCCACG GCAACGGTGT GTTTTCCGTG 
GCCCCGATCA AGCAGGGCGA GCGCGTGATC CAGTACAAGG GCCTGCTGCG CAGCCACGGC
GACGTCGATG CCGATGACAG CGGCGATGTT GAAAGTGGCC ATACCTTCCT GTTCACCCTC
AACGACGACT GGGTGATCGA TGCCAACTAC AAGGGCAACG ACGCGCGCTG GATCAACCAC
AGCTGCGACC CGAACTGCGA GGCGGTGATC GAGGAAGACG AAGACGGCGA CAGCCGCGGC
GACAAGGTCT TCATCGAGGC GCTGCGCGAT ATCCAGGCCG GCGAAGAGCT GACCTACAAC
TACGGCATCA CCCTGGCCGA GCGCCATACG GCCAAGCTGA AGAAGATCTG GGAGTGCCGC
TGCGGCTCGC CCAAGTGCAC CGGCACCATG CTGCAGCCCA AGCGCTGA
 
Protein sequence
MPKKIQARKS AIHGNGVFSV APIKQGERVI QYKGLLRSHG DVDADDSGDV ESGHTFLFTL 
NDDWVIDANY KGNDARWINH SCDPNCEAVI EEDEDGDSRG DKVFIEALRD IQAGEELTYN
YGITLAERHT AKLKKIWECR CGSPKCTGTM LQPKR