Gene Smal_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0977 
Symbol 
ID6478332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1117096 
End bp1117365 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content66% 
IMG OID642730141 
ProductTransglycosylase-associated protein 
Protein accessionYP_002027365 
Protein GI194364755 
COG category[S] Function unknown 
COG ID[COG2261] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.258897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0607093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGTC TGTTCGGCAG CAGCAGCTGG CTGTACATCA TCCTGGTCGG CTTCTTCGTC 
GGCCTGCTCG GGCGATTCTT CATGCCCGGC AACAACCGCA TGGGCTGCCT CCTGACCATC
GTGCTGGGCA TCATCGGCGC GCTGCTGGCC GGGTGGTTCG GCCAGTACAT GGGCTGGTAC
GCCGCCGGCG AACCGGCCGG TTTCTTCGGT GCGGTCGTGG GCGCGGTCGT CGTGCTGGCG
ATCCTGCGCC TGTTCAGCGG TCGCCGCTGA
 
Protein sequence
MNGLFGSSSW LYIILVGFFV GLLGRFFMPG NNRMGCLLTI VLGIIGALLA GWFGQYMGWY 
AAGEPAGFFG AVVGAVVVLA ILRLFSGRR