| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0837 |
|---|
| Symbol | clpX |
|---|
| ID | 6478028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 970231 |
|---|
| End bp | 971520 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642729993 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_002027225 |
|---|
| Protein GI | 194364615 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.152492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG ACCGCCAAGG TCGTTCCACG GACACCGGCA AGATCCTCTA CTGCTCTTTC
TGCGGCAAGA GCCAGCATGA AGTGCGCAAG CTGATTGCGG GTCCGAGCGT GTTCATCTGC
GATGAATGCG TGGAGCTGTG CAACGACATC ATCCGTGAGG AACTTGAGGA AAAGGCGCAG
TCGGCGCGCA GCTCGCTGCC CAAGCCGCGC GAGATCCTCG AGGTCCTCGA CCAGTACGTG
ATTGGCCAGA ACCGTGCCAA GCGCACCTTG GCCGTGGCCG TGTACAACCA CTACAAGCGC
ATCGAGAGCC GGCAGAAGAA CGACGAGGTC GAACTGGCCA AGTCGAACAT CCTGCTGGTC
GGCCCGACCG GTTCGGGCAA GACGCTGCTG GCCGAGACCC TGGCCCGCCT GCTCAACGTG
CCGTTCACCA TGGCCGACGC CACCACGCTG ACCGAAGCCG GTTACGTGGG CGAGGACGTG
GAGAACATCA TCCAGAAGCT GCTGCAGAAG TGCGACTACG ACGTCGAGAA GGCGCAGCAG
GGCATCGTCT ACATCGATGA AATCGACAAG ATCTCGCGCA AGAGCGAGAA CCCGTCGATC
ACCCGCGATG TGTCCGGCGA AGGCGTGCAG CAGGCCCTGC TGAAGCTGAT CGAAGGCACC
GTGGCCAGCG TTCCGCCGCA GGGCGGCCGC AAGCACCCGC AGCAGGAATT CCTGCAGGTG
GACACCAAGA ACATCCTGTT CATCTGCGGC GGCGCGTTCG CCGGGCTGGA CAAGGTGATC
CAGGCCCGTT CCACCGACGT CGGCAGCATC GGCTTCGGCG CCAAGGTGAA GAGCGCCGAG
CGCAAGCAGG AAGTGGGCAA GGTGCTGGCT GAAGTCGAGC CGGAAGACCT GATCAAGTTC
GGCCTGATCC CCGAGTTCGT CGGCCGCCTG CCGGTGGTGG CAACCCTGGA GGAGCTGGAC
GAGCCGGCCC TGATCAAGAT CCTGACCGAG CCGAAGAACG CCATCACCAA GCAGTTCAAG
AAGCTGTTCG AGATGGAGAA CGTCGAGCTG GAGTTCCGTC CGGACGCGCT GTCGGCCATT
GCCAGGAAGG CGCTCAAGCG CAAGACCGGC GCCCGTGGCC TGCGCACCAT CGTCGAATCG
GTCCTGCTGG ACACCATGTA CGACCTGCCG TCGCAGGAAA ACGTCAGCAA GGTGGTGGTG
GACGAGTCGG TGATCGAGCA CAAGTCCGAG CCGTACCTGA TCTACCAGAC CCCGGCGGCC
CCTGAACAGA AAGCCGCAGG CGCCGAGTGA
|
|---|
| Protein sequence | MSEDRQGRST DTGKILYCSF CGKSQHEVRK LIAGPSVFIC DECVELCNDI IREELEEKAQ
SARSSLPKPR EILEVLDQYV IGQNRAKRTL AVAVYNHYKR IESRQKNDEV ELAKSNILLV
GPTGSGKTLL AETLARLLNV PFTMADATTL TEAGYVGEDV ENIIQKLLQK CDYDVEKAQQ
GIVYIDEIDK ISRKSENPSI TRDVSGEGVQ QALLKLIEGT VASVPPQGGR KHPQQEFLQV
DTKNILFICG GAFAGLDKVI QARSTDVGSI GFGAKVKSAE RKQEVGKVLA EVEPEDLIKF
GLIPEFVGRL PVVATLEELD EPALIKILTE PKNAITKQFK KLFEMENVEL EFRPDALSAI
ARKALKRKTG ARGLRTIVES VLLDTMYDLP SQENVSKVVV DESVIEHKSE PYLIYQTPAA
PEQKAAGAE
|
|---|
| |